Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G372700.1 | Wheat | cytosol | 97.59 | 97.59 |
| TraesCS5B01G365600.1 | Wheat | cytosol | 95.9 | 96.01 |
| HORVU5Hr1G089280.1 | Barley | cytosol | 95.17 | 94.6 |
| Os09t0560000-01 | Rice | cytosol | 73.7 | 73.35 |
| EER99353 | Sorghum | cytosol | 73.58 | 72.88 |
| Zm00001d021378_P007 | Maize | cytosol | 71.65 | 70.05 |
| GSMUA_Achr4P12500_001 | Banana | mitochondrion | 30.04 | 42.13 |
| GSMUA_Achr9P23120_001 | Banana | mitochondrion | 42.22 | 41.72 |
| VIT_11s0065g00460.t01 | Wine grape | cytosol | 37.64 | 37.55 |
| Solyc07g042580.2.1 | Tomato | cytosol | 36.79 | 36.61 |
| PGSC0003DMT400035319 | Potato | nucleus | 34.26 | 35.77 |
| KRH74132 | Soybean | cytosol, endoplasmic reticulum, nucleus | 33.17 | 34.16 |
| CDX78782 | Canola | nucleus | 34.14 | 33.81 |
| AT2G07170.1 | Thale cress | cytosol | 33.17 | 33.54 |
| CDY38410 | Canola | nucleus | 31.6 | 33.38 |
| TraesCS2A01G221200.6 | Wheat | plastid | 24.97 | 23.39 |
| TraesCS7A01G236800.1 | Wheat | cytosol | 16.89 | 22.33 |
| TraesCS6A01G311500.1 | Wheat | cytosol | 15.68 | 22.07 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0005874 | GO:GO:0008017 | InterPro:IPR011989 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF5 | SMART:SM01349 |
| SUPFAM:SSF48371 | InterPro:TOG | InterPro:TORTIFOLIA1/SPIRAL2-like | EnsemblPlantsGene:TraesCS5A01G363500 | EnsemblPlants:TraesCS5A01G363500.1 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:564079958..564083775
Molecular Weight (calculated)
90032.0 Da
IEP (calculated)
8.138
GRAVY (calculated)
-0.291
Length
829 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSTAAPSK GKAAFELKHR LLQALNKIAD RDTYQIGLSE LHATVDALAP DMVGPFLSCV IDTDADQKSA VRKECVKAIG ALARSHGALL APHMPKLVAS
101: VVRRLKDADS VVRDACVDTC GTLSACAREF GDGGAALVAL VRPLFESLGE QNRYVQAGAA LCLAKVIDES SYFPGPVLPQ MLVRVVKILK NPHFMAKPAV
201: IELLRSIVQA EGASTEQALS SALTSIMDSL KSSDWTTRKA ASLALSSIAV SSGYLVASFR TSCLRSLERC KFDKVKPVRD AITHAIQLWK AIPGSETPEP
301: SEAGSSTKEN FFGDHNDARS VHDGGSRATS FRRVEPTPSA SVVSGSSITS VKKRSPLSVN KIPQNNASNQ QHLKSSDWHV EISVPKQNTV PDLVKKGYGS
401: NRMLKYAKGS PYGIVDEDIK SDYDPMDDKQ ECSSLSEVAS RSYETKHVTS ALEVTEDVTE LYPRARETKS IDSTVTDVTS HGTHTCCLSA TKELALIRKQ
501: LQEMERKQAN LFDLLQEFMS NSVENMSVLN SKVHNLEYAV DKTVYTITQS ESRYQLPGSK GFKNQSVSSS PRLSNSTPRS SVDANFRPPT IPHLKQEKKW
601: AHDLPSKGMS TCVKEGHEFL KAHARNRVMK PGAGSSEESY IPSLVRDRAS GVKGTFPVPF TSPCDQSDLQ NALCASNQAG EFRGADGMEP AYAEALSYGD
701: SDDLIDLMDR TGPVLDKLSR ETANELLRVI ADQFLGTKLF DLALPWIQQV VDLSTVYKPS QVFVSARAQR EFLAALEEAA TSGSTEPAVR IAIVQLAFKL
801: TKACEAAPCR KISTRVSRGS ESVVMATVM
101: VVRRLKDADS VVRDACVDTC GTLSACAREF GDGGAALVAL VRPLFESLGE QNRYVQAGAA LCLAKVIDES SYFPGPVLPQ MLVRVVKILK NPHFMAKPAV
201: IELLRSIVQA EGASTEQALS SALTSIMDSL KSSDWTTRKA ASLALSSIAV SSGYLVASFR TSCLRSLERC KFDKVKPVRD AITHAIQLWK AIPGSETPEP
301: SEAGSSTKEN FFGDHNDARS VHDGGSRATS FRRVEPTPSA SVVSGSSITS VKKRSPLSVN KIPQNNASNQ QHLKSSDWHV EISVPKQNTV PDLVKKGYGS
401: NRMLKYAKGS PYGIVDEDIK SDYDPMDDKQ ECSSLSEVAS RSYETKHVTS ALEVTEDVTE LYPRARETKS IDSTVTDVTS HGTHTCCLSA TKELALIRKQ
501: LQEMERKQAN LFDLLQEFMS NSVENMSVLN SKVHNLEYAV DKTVYTITQS ESRYQLPGSK GFKNQSVSSS PRLSNSTPRS SVDANFRPPT IPHLKQEKKW
601: AHDLPSKGMS TCVKEGHEFL KAHARNRVMK PGAGSSEESY IPSLVRDRAS GVKGTFPVPF TSPCDQSDLQ NALCASNQAG EFRGADGMEP AYAEALSYGD
701: SDDLIDLMDR TGPVLDKLSR ETANELLRVI ADQFLGTKLF DLALPWIQQV VDLSTVYKPS QVFVSARAQR EFLAALEEAA TSGSTEPAVR IAIVQLAFKL
801: TKACEAAPCR KISTRVSRGS ESVVMATVM
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Arabidopsis Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.