Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035319 | Potato | nucleus | 87.52 | 91.81 |
| VIT_11s0065g00460.t01 | Wine grape | cytosol | 52.82 | 52.95 |
| KRH74132 | Soybean | cytosol, endoplasmic reticulum, nucleus | 42.02 | 43.48 |
| Zm00001d018800_P001 | Maize | extracellular, mitochondrion | 7.92 | 41.77 |
| AT2G07170.1 | Thale cress | cytosol | 39.74 | 40.37 |
| CDY38410 | Canola | nucleus | 36.97 | 39.24 |
| CDX78782 | Canola | nucleus | 39.14 | 38.95 |
| GSMUA_Achr4P12500_001 | Banana | mitochondrion | 27.61 | 38.92 |
| Os09t0560000-01 | Rice | cytosol | 38.78 | 38.78 |
| GSMUA_Achr9P23120_001 | Banana | mitochondrion | 38.9 | 38.62 |
| TraesCS5B01G365600.1 | Wheat | cytosol | 37.09 | 37.32 |
| HORVU5Hr1G089280.1 | Barley | cytosol | 36.85 | 36.81 |
| TraesCS5D01G372700.1 | Wheat | cytosol | 36.61 | 36.79 |
| TraesCS5A01G363500.1 | Wheat | cytosol | 36.61 | 36.79 |
| Zm00001d021378_P007 | Maize | cytosol | 36.49 | 35.85 |
| EER99353 | Sorghum | cytosol | 36.01 | 35.84 |
| Solyc03g113680.2.1 | Tomato | nucleus | 18.49 | 24.6 |
| Solyc05g006550.2.1 | Tomato | cytosol | 19.57 | 24.55 |
| Solyc10g006350.2.1 | Tomato | plastid | 24.13 | 23.26 |
| Zm00001d013733_P002 | Maize | mitochondrion | 7.68 | 22.15 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Cohesin_HEAT | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0005874 | GO:GO:0008017 | InterPro:HEAT | InterPro:IPR011989 | UniProt:K4CEB9 | PFAM:PF02985 |
| PFAM:PF12765 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF5 | SMART:SM01349 | SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc07g042580.2 |
| EnsemblPlants:Solyc07g042580.2.1 | InterPro:TOG | InterPro:TORTIFOLIA1/SPIRAL2-like | UniParc:UPI000276BFFB | SEG:seg | : |
Description
No Description!
Coordinates
chr7:+:56044485..56049931
Molecular Weight (calculated)
91814.8 Da
IEP (calculated)
8.292
GRAVY (calculated)
-0.396
Length
833 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTHVNMMKG RGPSRVNGQQ VVFELKQRVV LALNKLADRD TYQIGVEELE KIIERLTPDG VPPFLSCILD TDSEQKSAVR KESIRLMGTL ANFHDSIVVP
101: HLGKMVTSIV KRLKDSDTVV RDACVDTVGI LASKMSSVAC DNENDGVFVV LVRPIFEALG EQNKHVQTGS ALCLARVIDS IQNPPAVILQ KMLGKTVKLL
201: KNPHFMAKPA VIELNRSIIQ AGGASTHSAL STAMTSIQEG LKNSDWATRK AACAALGDIA SVGGAFFSAF KSSSIRTLES CRFDKVKPVR DSALQALHMW
301: KRLPGHGTSE PSEAGSSIKE NLYKDDYGDI TSASESTLKD VTPKKFGCDS VKNKLPLSLR KAGQNHIEKP QHSGADEWHV EIAVPKTRKI FMPEVRDEES
401: ESSSVTKAFE KGSGTRSSHD VEYEYVHIDD KQECSSGSNL FPDNFQCKEV VGSHDVIDEA SLSTPLGTSR RSAVEEISIE EQRYLSGMQD RRSLDSTVTD
501: LSSQKLHGCC SQVTKEMLSV RKQLLDIENK QSNLLDLLKE FTSNIVDNLS MMQMKVSGLE GMVDRMAKEL SHGGKFPDPA TTKFMKRSPA VASPRLSTYT
601: PRPSVDIPHR TSPLVPTKDV EVRGDRTLVK SRSSSFRNQN LDKWIDPAAK QGGYPVGKGM HQNSGQVTHG GQLRRNKDAF GRNSTTNDKQ NQLDVKNNLW
701: RVVKGHLLGG DVDSAYMEAL YSGDELVLFK LIDTTGPVLE NLSQKTTNDL LATLASYVFE QTYVNSIIPW LQQVVELCSA HGPDYIVLPT NAKREFLSAF
801: QEMIKGGYST LAEKKSLMQL AMTLNQIWGK NAP
101: HLGKMVTSIV KRLKDSDTVV RDACVDTVGI LASKMSSVAC DNENDGVFVV LVRPIFEALG EQNKHVQTGS ALCLARVIDS IQNPPAVILQ KMLGKTVKLL
201: KNPHFMAKPA VIELNRSIIQ AGGASTHSAL STAMTSIQEG LKNSDWATRK AACAALGDIA SVGGAFFSAF KSSSIRTLES CRFDKVKPVR DSALQALHMW
301: KRLPGHGTSE PSEAGSSIKE NLYKDDYGDI TSASESTLKD VTPKKFGCDS VKNKLPLSLR KAGQNHIEKP QHSGADEWHV EIAVPKTRKI FMPEVRDEES
401: ESSSVTKAFE KGSGTRSSHD VEYEYVHIDD KQECSSGSNL FPDNFQCKEV VGSHDVIDEA SLSTPLGTSR RSAVEEISIE EQRYLSGMQD RRSLDSTVTD
501: LSSQKLHGCC SQVTKEMLSV RKQLLDIENK QSNLLDLLKE FTSNIVDNLS MMQMKVSGLE GMVDRMAKEL SHGGKFPDPA TTKFMKRSPA VASPRLSTYT
601: PRPSVDIPHR TSPLVPTKDV EVRGDRTLVK SRSSSFRNQN LDKWIDPAAK QGGYPVGKGM HQNSGQVTHG GQLRRNKDAF GRNSTTNDKQ NQLDVKNNLW
701: RVVKGHLLGG DVDSAYMEAL YSGDELVLFK LIDTTGPVLE NLSQKTTNDL LATLASYVFE QTYVNSIIPW LQQVVELCSA HGPDYIVLPT NAKREFLSAF
801: QEMIKGGYST LAEKKSLMQL AMTLNQIWGK NAP
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Arabidopsis Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.