Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78782 | Canola | nucleus | 83.18 | 78.02 |
| AT2G07170.1 | Thale cress | cytosol | 68.41 | 65.49 |
| VIT_11s0065g00460.t01 | Wine grape | cytosol | 43.18 | 40.79 |
| PGSC0003DMT400035319 | Potato | nucleus | 38.73 | 38.29 |
| Solyc07g042580.2.1 | Tomato | cytosol | 39.24 | 36.97 |
| Zm00001d018800_P001 | Maize | extracellular, mitochondrion | 7.39 | 36.71 |
| GSMUA_Achr4P12500_001 | Banana | mitochondrion | 27.52 | 36.55 |
| KRH74132 | Soybean | cytosol, endoplasmic reticulum, nucleus | 35.92 | 35.03 |
| GSMUA_Achr9P23120_001 | Banana | mitochondrion | 35.41 | 33.13 |
| Os09t0560000-01 | Rice | cytosol | 34.65 | 32.65 |
| EER99353 | Sorghum | cytosol | 34.65 | 32.5 |
| Zm00001d021378_P007 | Maize | cytosol | 34.39 | 31.84 |
| HORVU5Hr1G089280.1 | Barley | cytosol | 33.76 | 31.77 |
| TraesCS5B01G365600.1 | Wheat | cytosol | 33.38 | 31.64 |
| TraesCS5D01G372700.1 | Wheat | cytosol | 33.38 | 31.6 |
| TraesCS5A01G363500.1 | Wheat | cytosol | 33.38 | 31.6 |
| CDY33611 | Canola | cytosol, nucleus, plastid | 17.2 | 29.54 |
| CDY24496 | Canola | plastid | 16.82 | 28.45 |
| CDX68449 | Canola | cytosol | 2.42 | 25.68 |
| CDY16232 | Canola | plastid | 20.38 | 25.4 |
| CDY00306 | Canola | cytosol | 18.22 | 24.61 |
| CDY16768 | Canola | cytosol | 17.2 | 24.55 |
| CDY46411 | Canola | plastid | 18.85 | 24.42 |
| CDY56641 | Canola | cytosol | 17.83 | 24.26 |
| CDY62371 | Canola | plastid | 15.54 | 23.55 |
| CDX87253 | Canola | cytosol | 17.32 | 22.93 |
| CDY14680 | Canola | cytosol, plastid | 20.13 | 22.32 |
| CDY29609 | Canola | cytosol | 21.78 | 22.12 |
| CDY07335 | Canola | cytosol | 22.8 | 21.59 |
| CDY29271 | Canola | plastid | 23.44 | 21.37 |
| Zm00001d013733_P002 | Maize | mitochondrion | 7.77 | 21.11 |
| CDX89282 | Canola | plastid | 23.18 | 19.14 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | UniProt:A0A078HIX9 | InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlants:CDY38410 |
| ProteinID:CDY38410 | ProteinID:CDY38410.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 |
| EnsemblPlantsGene:GSBRNA2T00065841001 | InterPro:IPR011989 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF5 | SUPFAM:SSF48371 | InterPro:TORTIFOLIA1/SPIRAL2-like |
| UniParc:UPI0004EE8B92 | SEG:seg | : | : | : | : |
Description
BnaC01g10190DBnaC01g10190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIX9]
Coordinates
chrLK032423:-:215186..218625
Molecular Weight (calculated)
86052.0 Da
IEP (calculated)
8.009
GRAVY (calculated)
-0.364
Length
785 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTTNMQAKG RGGGNMKAAN PQQVIFELKK KVVTALNKLA DRDTHQRGVD ELENTVEHLA PDKISCFLSC ILDTDSEQKS AVRKECIRLM ATLARFHHGL
101: VAPYLAKMVS SVVKRLKDQD SVVRDACIET MGVLASKMSC YEDESYGVFV SLVKPLFEAI GDQNKYVQSG AALCLARVVD SSPEAPVAII QRMLTKTVKL
201: LNSSHFIAKP AVIELNRSII LAGGATTKSV LISAMSSFQD ALKNKDWTTR KAASVALMEI AATGEKFLGP LKASCISSLE SCRFDKVKPV RDSIVLALQY
301: WKGVPGSDSQ EPSETVSSVR ESYSGAQGDS ELFSTSDSKS KDVTSNKYVI DLARKKVPFS ARNAPTRYNE RTKQDNWRIE IAVPESPIVS KVNLHNEESE
401: GSCITKTFAE AANTPEVTYE YIPIEDKAGC YVTDAVNEND DIKSVTVSKE FAAEETYSEE QQFSTKVKNR TSTDSTVTVS SSEISHDCCA QISNEMASVR
501: KQLSDIENKQ SRLIDQLQVF STGIMNNFSA LQSKVLSLEY AVEGIAQNFA LHSDISNSNF VKLNQGSTVS PRLSSCTSRN STEIRNRQST LSSSKYSMTR
601: ENKTHGRSKL NVSQGKEKTP RSAFGEAGQQ HTREDIWNNV GQGRQTLSQT RKSSESVTKH YAEVMSGPGG SCEDVVEAEY LEVLSGGDEL ALVELLDRTG
701: PVLDNLSSNT VADLSTTNGA NYLIPSARKR AQVLSAIQET SCMGFSNLAE RRAVTQLAMK LRKLWGKLKS FLALTLGLRI CNIDL
101: VAPYLAKMVS SVVKRLKDQD SVVRDACIET MGVLASKMSC YEDESYGVFV SLVKPLFEAI GDQNKYVQSG AALCLARVVD SSPEAPVAII QRMLTKTVKL
201: LNSSHFIAKP AVIELNRSII LAGGATTKSV LISAMSSFQD ALKNKDWTTR KAASVALMEI AATGEKFLGP LKASCISSLE SCRFDKVKPV RDSIVLALQY
301: WKGVPGSDSQ EPSETVSSVR ESYSGAQGDS ELFSTSDSKS KDVTSNKYVI DLARKKVPFS ARNAPTRYNE RTKQDNWRIE IAVPESPIVS KVNLHNEESE
401: GSCITKTFAE AANTPEVTYE YIPIEDKAGC YVTDAVNEND DIKSVTVSKE FAAEETYSEE QQFSTKVKNR TSTDSTVTVS SSEISHDCCA QISNEMASVR
501: KQLSDIENKQ SRLIDQLQVF STGIMNNFSA LQSKVLSLEY AVEGIAQNFA LHSDISNSNF VKLNQGSTVS PRLSSCTSRN STEIRNRQST LSSSKYSMTR
601: ENKTHGRSKL NVSQGKEKTP RSAFGEAGQQ HTREDIWNNV GQGRQTLSQT RKSSESVTKH YAEVMSGPGG SCEDVVEAEY LEVLSGGDEL ALVELLDRTG
701: PVLDNLSSNT VADLSTTNGA NYLIPSARKR AQVLSAIQET SCMGFSNLAE RRAVTQLAMK LRKLWGKLKS FLALTLGLRI CNIDL
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Arabidopsis Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.