Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g042580.2.1 | Tomato | cytosol | 52.95 | 52.82 |
| PGSC0003DMT400035319 | Potato | nucleus | 50.3 | 52.64 |
| KRH74132 | Soybean | cytosol, endoplasmic reticulum, nucleus | 47.29 | 48.82 |
| AT2G07170.1 | Thale cress | cytosol | 48.13 | 48.78 |
| CDX78782 | Canola | nucleus | 46.45 | 46.12 |
| Zm00001d018800_P001 | Maize | extracellular, mitochondrion | 8.3 | 43.67 |
| CDY38410 | Canola | nucleus | 40.79 | 43.18 |
| GSMUA_Achr4P12500_001 | Banana | mitochondrion | 30.2 | 42.47 |
| GSMUA_Achr9P23120_001 | Banana | mitochondrion | 42.36 | 41.95 |
| Os09t0560000-01 | Rice | cytosol | 39.11 | 39.02 |
| Zm00001d021378_P007 | Maize | cytosol | 38.99 | 38.21 |
| EER99353 | Sorghum | cytosol | 38.39 | 38.11 |
| TraesCS5D01G372700.1 | Wheat | cytosol | 37.79 | 37.88 |
| TraesCS5B01G365600.1 | Wheat | cytosol | 37.67 | 37.8 |
| TraesCS5A01G363500.1 | Wheat | cytosol | 37.55 | 37.64 |
| HORVU5Hr1G089280.1 | Barley | cytosol | 37.42 | 37.29 |
| VIT_01s0026g01020.t01 | Wine grape | cytosol | 20.7 | 26.67 |
| VIT_17s0000g07470.t01 | Wine grape | cytosol | 20.22 | 26.33 |
| Zm00001d013733_P002 | Maize | mitochondrion | 9.03 | 25.95 |
| VIT_19s0090g00020.t01 | Wine grape | plastid | 26.71 | 23.67 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100253606 | wikigene:100253606 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ProteinID:CBI24067 | ProteinID:CBI24067.3 | InterPro:Cohesin_HEAT | UniProt:D7T0N8 | EMBL:FN595502 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0005874 | GO:GO:0008017 | InterPro:IPR011989 | EntrezGene:LOC100253606 | wikigene:LOC100253606 | PFAM:PF12765 |
| PANTHER:PTHR31355 | PANTHER:PTHR31355:SF5 | SMART:SM01349 | SUPFAM:SSF48371 | InterPro:TOG | InterPro:TORTIFOLIA1/SPIRAL2-like |
| UniParc:UPI0001BE25BF | ArrayExpress:VIT_11s0065g00460 | EnsemblPlantsGene:VIT_11s0065g00460 | EnsemblPlants:VIT_11s0065g00460.t01 | RefSeq:XP_002266058 | RefSeq:XP_002266058.1 |
| RefSeq:XP_010656710.1 | RefSeq:XP_010656711.1 | RefSeq:XP_010656712.1 | : | : | : |
Description
No Description!
Coordinates
chr11:+:14289240..14297403
Molecular Weight (calculated)
91881.2 Da
IEP (calculated)
7.415
GRAVY (calculated)
-0.280
Length
831 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTHTHLKAK GTTRVNTQQV IFELKHRVVL ALNKLADRDT YQIGVDELEK MVECLTPEGV APFLSCILDT DSELKSAVRK ECIRMMGMVA SFHGGIIGPH
101: LGKMMASIVK RLKDSDSVVR DACVETVGML ASKLSNGEGE SDAVFVTLVK PLFEALGEQN KQVQSGSALC LARIIDNTND PPISILQRML TRIIKLLKNP
201: HFMAKPAVIE LNRSIIQAGG APTQNVLSAA ITSIQEALKN SDWTTRKAAS VALGEIVSSG GSFLGSFKAS CICSLESCRF DKVKPVRDTV LHALQYWRSL
301: PGPDTPEPSE AGSSIKENFC GGDYSDLTSA SDSGWKDAML KKVATDTIKM RRIPLSVRKT CQNYVENPQH SKANDWNIEI AVSKAHNVSL TDVHNEESEG
401: SSVTKTLERT SADVKSMQDI GYEYGTINDK QECSSASNVV DNFETKFVTV SDDFEGGRNL MGTNQRFKAE EISSEEQIFL AKVQDRRSLD STVTELSSQP
501: VRGCCLQTAN EMVSIRKQLL EIENKQSSLM DLLQVFTTRT MDSLSMIQSK VLGLEHVVDR LAQDLVHGVK YSDLAGTKLL RKGQNVASPR LSTCTPRPSI
601: DLPNKQATLT SMKNTEIWEE RTFSRSRSIN SAKQDMEIWT DTTAKINRNS VRKGIQNNSV KGTQNMACIQ TRKTDAVFLP ASIGNTKQNG SECKNSLWHC
701: VKGFLCEGDI ESAYVEALCS GDELVLVELL DRTGPVLECL SHKTVNDILC ILASYFLEQR FMNSVIPWLQ QVVDLSTIHG PNYLVLSAKA RREFLSAVEE
801: AVNMEFPNPA ERRSVTQLAM KLHQLWGKCS R
101: LGKMMASIVK RLKDSDSVVR DACVETVGML ASKLSNGEGE SDAVFVTLVK PLFEALGEQN KQVQSGSALC LARIIDNTND PPISILQRML TRIIKLLKNP
201: HFMAKPAVIE LNRSIIQAGG APTQNVLSAA ITSIQEALKN SDWTTRKAAS VALGEIVSSG GSFLGSFKAS CICSLESCRF DKVKPVRDTV LHALQYWRSL
301: PGPDTPEPSE AGSSIKENFC GGDYSDLTSA SDSGWKDAML KKVATDTIKM RRIPLSVRKT CQNYVENPQH SKANDWNIEI AVSKAHNVSL TDVHNEESEG
401: SSVTKTLERT SADVKSMQDI GYEYGTINDK QECSSASNVV DNFETKFVTV SDDFEGGRNL MGTNQRFKAE EISSEEQIFL AKVQDRRSLD STVTELSSQP
501: VRGCCLQTAN EMVSIRKQLL EIENKQSSLM DLLQVFTTRT MDSLSMIQSK VLGLEHVVDR LAQDLVHGVK YSDLAGTKLL RKGQNVASPR LSTCTPRPSI
601: DLPNKQATLT SMKNTEIWEE RTFSRSRSIN SAKQDMEIWT DTTAKINRNS VRKGIQNNSV KGTQNMACIQ TRKTDAVFLP ASIGNTKQNG SECKNSLWHC
701: VKGFLCEGDI ESAYVEALCS GDELVLVELL DRTGPVLECL SHKTVNDILC ILASYFLEQR FMNSVIPWLQ QVVDLSTIHG PNYLVLSAKA RREFLSAVEE
801: AVNMEFPNPA ERRSVTQLAM KLHQLWGKCS R
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Arabidopsis Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.