Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g042580.2.1 | Tomato | cytosol | 91.81 | 87.52 |
| VIT_11s0065g00460.t01 | Wine grape | cytosol | 52.64 | 50.3 |
| KRH74132 | Soybean | cytosol, endoplasmic reticulum, nucleus | 42.07 | 41.49 |
| Zm00001d018800_P001 | Maize | extracellular, mitochondrion | 8.06 | 40.51 |
| AT2G07170.1 | Thale cress | cytosol | 40.3 | 39.02 |
| CDY38410 | Canola | nucleus | 38.29 | 38.73 |
| GSMUA_Achr4P12500_001 | Banana | mitochondrion | 28.59 | 38.41 |
| CDX78782 | Canola | nucleus | 39.42 | 37.4 |
| GSMUA_Achr9P23120_001 | Banana | mitochondrion | 39.29 | 37.19 |
| Os09t0560000-01 | Rice | cytosol | 38.04 | 36.25 |
| TraesCS5B01G365600.1 | Wheat | cytosol | 36.02 | 34.54 |
| TraesCS5D01G372700.1 | Wheat | cytosol | 35.89 | 34.38 |
| TraesCS5A01G363500.1 | Wheat | cytosol | 35.77 | 34.26 |
| EER99353 | Sorghum | cytosol | 35.89 | 34.05 |
| Zm00001d021378_P007 | Maize | cytosol | 36.02 | 33.73 |
| HORVU5Hr1G089280.1 | Barley | cytosol | 35.39 | 33.69 |
| PGSC0003DMT400058293 | Potato | extracellular | 19.9 | 24.61 |
| PGSC0003DMT400063183 | Potato | cytosol | 19.02 | 24.32 |
| Zm00001d013733_P002 | Maize | mitochondrion | 7.81 | 21.45 |
| PGSC0003DMT400037390 | Potato | plastid | 22.17 | 20.42 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Cohesin_HEAT | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0005874 | GO:GO:0008017 | InterPro:HEAT | InterPro:IPR011989 | UniProt:M1B246 | PFAM:PF02985 |
| PFAM:PF12765 | EnsemblPlantsGene:PGSC0003DMG400013571 | PGSC:PGSC0003DMG400013571 | EnsemblPlants:PGSC0003DMT400035319 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF5 |
| SMART:SM01349 | SUPFAM:SSF48371 | InterPro:TOG | InterPro:TORTIFOLIA1/SPIRAL2-like | UniParc:UPI0002959401 | SEG:seg |
Description
Microtubule-associated protein TORTIFOLIA1 [Source:PGSC_GENE;Acc:PGSC0003DMG400013571]
Coordinates
chr7:+:40679359..40682866
Molecular Weight (calculated)
87607.4 Da
IEP (calculated)
8.055
GRAVY (calculated)
-0.397
Length
794 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTHVNMVKG RGPSRGNGQQ VVFELKQRVV LALNKLADRD TYHIGVEELE KIIECLTPDG VTPFLSCILD TDSEQKSSVR KESIRLMGTL ANFHDSIVVP
101: HLGKMVASIV KRLKDSDTVV RDACVDTVGI LASKMSSVAR DNENDGVFVV LVRPIFEALG EQNKHVQTGS ALCLARVIDS IQNPPAVILQ KILGKTVKLL
201: KNPHFMAKPA VIELNRSIIQ AGGTSTHSAL STAMTSIQEG LKNSDWATRK AACAALGDIA SVGGAFFSAF KSSSIRTLES CRFDKVKPVR DSALQALHMW
301: KRLPCHGTSE PSEAGSSIKE NLYKDDYGDI TSASESTLKD VTPKKFGCDS VKNKLPLSLR KAGHNHVEKP QHSGADEWHV EIAVPKTRKI FMPEVRDEES
401: EGSSVTKAFE KGAGTRSSHD VEYEYVHIDD KQECSSGSNL FPDNFQRKEV VGSHDVIDEA SLGTPLGTSR RSAVEEISIE EQRYFSGMQD RRSLDSTVTD
501: LSSQKLHGCC SQVAKEMLSV RKQLLDIENK QSNLLDLLKE FTSNIVDNLS MMQIKVSSLE GMVDRMSKEL SHGGKFPDPA TTKFMKRSPA VASPRLSTYT
601: PRPSVDIPHR KSPLLPTKEV EVRGDRTLVK SRSSSFRNQN LDMWIDPAAK QGGYSVGKGI HQNSGQGTHG GQLRRNKDVI GRTATTNDKQ NHLDAKNNVW
701: RVVKEHLLGA DVDSAYMEAL YSGDELLLFE LVDTTGPVLE NLSQKTANDL LATLASYFFE QTYVNSIIPW LQQASASCGY QNLKTNYMLF LYFS
101: HLGKMVASIV KRLKDSDTVV RDACVDTVGI LASKMSSVAR DNENDGVFVV LVRPIFEALG EQNKHVQTGS ALCLARVIDS IQNPPAVILQ KILGKTVKLL
201: KNPHFMAKPA VIELNRSIIQ AGGTSTHSAL STAMTSIQEG LKNSDWATRK AACAALGDIA SVGGAFFSAF KSSSIRTLES CRFDKVKPVR DSALQALHMW
301: KRLPCHGTSE PSEAGSSIKE NLYKDDYGDI TSASESTLKD VTPKKFGCDS VKNKLPLSLR KAGHNHVEKP QHSGADEWHV EIAVPKTRKI FMPEVRDEES
401: EGSSVTKAFE KGAGTRSSHD VEYEYVHIDD KQECSSGSNL FPDNFQRKEV VGSHDVIDEA SLGTPLGTSR RSAVEEISIE EQRYFSGMQD RRSLDSTVTD
501: LSSQKLHGCC SQVAKEMLSV RKQLLDIENK QSNLLDLLKE FTSNIVDNLS MMQIKVSSLE GMVDRMSKEL SHGGKFPDPA TTKFMKRSPA VASPRLSTYT
601: PRPSVDIPHR KSPLLPTKEV EVRGDRTLVK SRSSSFRNQN LDMWIDPAAK QGGYSVGKGI HQNSGQGTHG GQLRRNKDVI GRTATTNDKQ NHLDAKNNVW
701: RVVKEHLLGA DVDSAYMEAL YSGDELLLFE LVDTTGPVLE NLSQKTANDL LATLASYFFE QTYVNSIIPW LQQASASCGY QNLKTNYMLF LYFS
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Arabidopsis Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.