Factsheet for Zm00001d018800_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

mitochondrion 4
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013733_P002	Maize	mitochondrion	37.97	20.76
Zm00001d017306_P002	Maize	cytosol	24.05	12.06
Zm00001d021378_P007	Maize	cytosol	63.29	11.79
GSMUA_Achr4P12500_001	Banana	mitochondrion	41.14	11.0
Zm00001d016462_P001	Maize	cytosol	24.68	9.2
Zm00001d044701_P001	Maize	cytosol	25.95	8.42
VIT_11s0065g00460.t01	Wine grape	cytosol	43.67	8.3
GSMUA_Achr9P23120_001	Banana	mitochondrion	43.67	8.22
KRH74132	Soybean	cytosol, endoplasmic reticulum, nucleus	41.14	8.07
PGSC0003DMT400035319	Potato	nucleus	40.51	8.06
Solyc07g042580.2.1	Tomato	cytosol	41.77	7.92
Zm00001d037271_P001	Maize	cytosol	29.11	7.49
CDY38410	Canola	nucleus	36.71	7.39
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	28.48	7.35
Zm00001d044760_P001	Maize	cytosol	27.85	7.25
AT2G07170.1	Thale cress	cytosol	37.34	7.2
CDX78782	Canola	nucleus	36.71	6.93
Zm00001d021641_P002	Maize	plastid	25.95	4.42
Zm00001d006504_P005	Maize	plastid	25.95	4.41

Protein Annotations

EnsemblPlants:Zm00001d018800_P001	EnsemblPlants:Zm00001d018800_T001	EnsemblPlantsGene:Zm00001d018800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017
InterPro:ARM-type_fold	InterPro:TORTIFOLIA1/SPIRAL2-like	PANTHER:PTHR31355	PANTHER:PTHR31355:SF5	ProteinID:ONM51370.1	SEG:seg
SUPFAM:SSF48371	UniParc:UPI0008440F3C	UniProt:A0A1D6HSI0	MapMan:35.1	:	:

Description

ARM repeat superfamily protein

Coordinates

chr7:+:5595528..5600546

Molecular Weight (calculated)

17405.1 Da

IEP (calculated)

8.484

GRAVY (calculated)

-0.045

Length

158 amino acids

Sequence
(BLAST)

001: MLVRAVKLLK NLHFMAKPAA IDLIRSIIQA EGASTEQALS SALTSIMDAL NSTDWNTRKA VSLALSSIAI SSGYLVTSFR NSCLRSLECS KFDKVKPVRD
101: TIIYMQFSCE KLFQGLILLN HEAGSSTKEQ IPKRFHTMRL TYDATTKIEV DGDEDGGG

Best Arabidopsis Sequence Match ( AT2G07170.1 )
(BLAST)

001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS

Arabidopsis Description

TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.