Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99458 | Sorghum | plastid | 85.79 | 86.44 |
| Zm00001d021641_P002 | Maize | plastid | 81.92 | 82.09 |
| Os07t0520400-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 71.91 | 74.64 |
| TraesCS2B01G246900.8 | Wheat | plastid | 68.78 | 72.37 |
| HORVU2Hr1G046160.2 | Barley | cytosol, plastid | 53.71 | 71.59 |
| TraesCS2A01G221200.6 | Wheat | plastid | 66.85 | 70.17 |
| TraesCS2D01G226900.1 | Wheat | plastid | 66.63 | 69.94 |
| GSMUA_Achr9P11640_001 | Banana | cytosol | 48.65 | 52.5 |
| GSMUA_Achr9P02790_001 | Banana | plastid | 39.29 | 48.73 |
| VIT_19s0090g00020.t01 | Wine grape | plastid | 44.35 | 43.92 |
| PGSC0003DMT400037390 | Potato | plastid | 40.15 | 43.27 |
| Solyc10g006350.2.1 | Tomato | plastid | 40.04 | 43.06 |
| KRG98830 | Soybean | plastid | 42.2 | 42.47 |
| KRH46114 | Soybean | plastid | 41.44 | 41.58 |
| Bra030470.1-P | Field mustard | cytosol | 32.4 | 38.94 |
| CDY29609 | Canola | cytosol | 32.29 | 38.81 |
| AT1G50890.1 | Thale cress | plastid | 32.94 | 37.27 |
| CDY29271 | Canola | plastid | 34.23 | 36.93 |
| AT4G27060.1 | Thale cress | plastid | 34.12 | 36.69 |
| CDY07335 | Canola | cytosol | 31.86 | 35.71 |
| CDX89282 | Canola | plastid | 34.23 | 33.44 |
| Bra026382.1-P | Field mustard | plastid | 34.88 | 32.86 |
| Zm00001d018800_P001 | Maize | extracellular, mitochondrion | 4.41 | 25.95 |
| Zm00001d037271_P001 | Maize | cytosol | 15.18 | 22.96 |
| Zm00001d017987_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 14.85 | 22.55 |
| Zm00001d044760_P001 | Maize | cytosol | 14.32 | 21.91 |
| Zm00001d013733_P002 | Maize | mitochondrion | 6.67 | 21.45 |
| Zm00001d021378_P007 | Maize | cytosol | 19.38 | 21.23 |
| Zm00001d016462_P001 | Maize | cytosol | 8.93 | 19.58 |
| Zm00001d044701_P001 | Maize | cytosol | 9.58 | 18.28 |
| Zm00001d017306_P002 | Maize | cytosol | 5.71 | 16.83 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:20.1.5.3 | UniProt:A0A1D6EX60 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 | InterPro:IPR011989 | ProteinID:ONM24081.1 | PANTHER:PTHR31355 |
| PANTHER:PTHR31355:SF7 | SUPFAM:SSF48371 | InterPro:TORTIFOLIA1/SPIRAL2-like | UniParc:UPI000844CF1D | EnsemblPlantsGene:Zm00001d006504 | EnsemblPlants:Zm00001d006504_P005 |
| EnsemblPlants:Zm00001d006504_T005 | SEG:seg | : | : | : | : |
Description
Microtubule-associated protein TORTIFOLIA1
Coordinates
chr2:-:210099039..210106998
Molecular Weight (calculated)
100365.0 Da
IEP (calculated)
6.230
GRAVY (calculated)
-0.464
Length
929 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAVSKSAV KSHPRLPTTA QPPPPNPGSN AASAGGGAAP PPPPSPAAGA TPSKNAAMAE LKSRVLAALA KLSDRDTHHI AVEELDRIIR APPSTDAVPM
101: LLNALAPDSP GLASPARREC LRLLATLCTS HPDAAASHLH KVLAHLARRL KDPASDTSVR DTCRDVAGQL AAVYLRPLSA SGVCEAGNAT VTLFVKPLFE
201: VMGEQSKSVQ GGAAACLAKA VEGAGPGPGA IGMFGKLGPR ICKLLGGQGV QAKAGLLGIM GSLAQVWKIQ VRFWSARSRS RICMNAILYS VIPFYNDIMR
301: TITMVIGLHN LSICSYLTFQ VGAISSQNMQ QTLQSIRDCL ENSDWATRKA AADTLSVFAT HSVHLIGDGT APTIAALEAC RFDKVRPVRD SMIDAVQLWK
401: KLTGEDANAD GRNKDLADGE GKLDSRRSIQ RGGKSESFDD SSPDSPSNNV KGSSIAEKAA FLLKKRPTLT DRELNPEFFQ KLETRKTDDL AVEVVVPHKT
501: LQSHLRGEDE TEEDDDPVGP ADSNGSAEDE ANLTQMRASF NFQNIRDKWA GQRGNRNKIT KARTTDVEDR GEPSTKDSTA AAMNISGEGP FINNKTNWLA
601: IQRQLSHLER QQTSLMNMLQ DFMGGSHDSM VTLENRVRGL ERVVEEMARE ISLSSGRRGG GPALGFDSSP GRSSKHNGFH EYSNSKYGRS GDGRMGFAER
701: YFSADAMASG TKNQSWRPDS EPWDSYAYSG SRSGMNVRRG LDSVSSDNRM ARNERSNDQV GPRRGWDKGQ GPFRFGEGPS ARSAWRASKD EATLEAIRVA
801: GEDNGNSRAA ARVAIPELDG EALNDDNQGD ERGPLWEAWT RAMDAVHLED MDSAYAELLS TGDAELLVKL MEQTGPVVDQ LSNEVANEVL HAVGQFLMEE
901: SLYDVALNWL QQVIHYILLQ ECNDVIIDE
101: LLNALAPDSP GLASPARREC LRLLATLCTS HPDAAASHLH KVLAHLARRL KDPASDTSVR DTCRDVAGQL AAVYLRPLSA SGVCEAGNAT VTLFVKPLFE
201: VMGEQSKSVQ GGAAACLAKA VEGAGPGPGA IGMFGKLGPR ICKLLGGQGV QAKAGLLGIM GSLAQVWKIQ VRFWSARSRS RICMNAILYS VIPFYNDIMR
301: TITMVIGLHN LSICSYLTFQ VGAISSQNMQ QTLQSIRDCL ENSDWATRKA AADTLSVFAT HSVHLIGDGT APTIAALEAC RFDKVRPVRD SMIDAVQLWK
401: KLTGEDANAD GRNKDLADGE GKLDSRRSIQ RGGKSESFDD SSPDSPSNNV KGSSIAEKAA FLLKKRPTLT DRELNPEFFQ KLETRKTDDL AVEVVVPHKT
501: LQSHLRGEDE TEEDDDPVGP ADSNGSAEDE ANLTQMRASF NFQNIRDKWA GQRGNRNKIT KARTTDVEDR GEPSTKDSTA AAMNISGEGP FINNKTNWLA
601: IQRQLSHLER QQTSLMNMLQ DFMGGSHDSM VTLENRVRGL ERVVEEMARE ISLSSGRRGG GPALGFDSSP GRSSKHNGFH EYSNSKYGRS GDGRMGFAER
701: YFSADAMASG TKNQSWRPDS EPWDSYAYSG SRSGMNVRRG LDSVSSDNRM ARNERSNDQV GPRRGWDKGQ GPFRFGEGPS ARSAWRASKD EATLEAIRVA
801: GEDNGNSRAA ARVAIPELDG EALNDDNQGD ERGPLWEAWT RAMDAVHLED MDSAYAELLS TGDAELLVKL MEQTGPVVDQ LSNEVANEVL HAVGQFLMEE
901: SLYDVALNWL QQVIHYILLQ ECNDVIIDE
001: MRSQTASKTS MKPSSNSSAF SVRSSVAVSS HSAMVELKQR ILTSLSRLGD RDTYQIAVDD LEKIVVSVPD SPEILPVLLH CLFDSSSDLK APVKRESIRL
101: LSFLCLSYTD LSFSQLAKII SHIVKRLKDA DNGVRDACRD AIGSLSAQFL KEKEVENGNY VGSSLVGLFA KPLFEAMAEQ NKSLQSGAAI CMGKMIDSAT
201: EPPVAAFQKL CPRISKLLNS PNYITKASLL PVVGSLSQVG AIAPQSLESL LHSIHECLGC TNWVTRKAAA DVLISLAVHS SSLVADKTDS TLTALEACRF
301: DKIKPVRESL SEALNVWKNI AGKGESGTMD DQKDVSSEQC ILERNGETDS VSCEEAGLVM QGSCDGLSSS SDSISKAVLI LRKKAPRLTG KDLNPEFFQK
401: LEKRGSGDMP VEVILPSRQK NSSNSNTEDE SDANTSVLRS RSNGLCRTAG VHTKQRHFGD FAREKWVDER MNGGESRLRA FDGDHTEVIQ ADTSENRGNW
501: PPLQRQLLHL ERQQTHIMNM LQDFMGGSHD GMISLENRVR GLERIVEEMS REMSIQSGAR GKATASWRSD VDGWDSPNYG PSSRNTQTST RKIRGTGPSE
601: QSGNSRRAWD KSSVAIRLGE GPSARSVWQA SKDEATLEAI RVAGEDCGTS RNRRVSIPEA EAMMDEDDDN RGGQQGDPIW TCWSNSVHAL RVGDTDSAFA
701: EVLSTGDDHL LVKLMDKTGP VLDQLSSDMG NEAIHSIAQF LLDHTLYDIC LSWIQQLLEV SVENGADFMG IPLELKKELL LNLHEALSTT DPPEDWEGLA
801: PDHLLVELAS NWNIEIQHFD T
101: LSFLCLSYTD LSFSQLAKII SHIVKRLKDA DNGVRDACRD AIGSLSAQFL KEKEVENGNY VGSSLVGLFA KPLFEAMAEQ NKSLQSGAAI CMGKMIDSAT
201: EPPVAAFQKL CPRISKLLNS PNYITKASLL PVVGSLSQVG AIAPQSLESL LHSIHECLGC TNWVTRKAAA DVLISLAVHS SSLVADKTDS TLTALEACRF
301: DKIKPVRESL SEALNVWKNI AGKGESGTMD DQKDVSSEQC ILERNGETDS VSCEEAGLVM QGSCDGLSSS SDSISKAVLI LRKKAPRLTG KDLNPEFFQK
401: LEKRGSGDMP VEVILPSRQK NSSNSNTEDE SDANTSVLRS RSNGLCRTAG VHTKQRHFGD FAREKWVDER MNGGESRLRA FDGDHTEVIQ ADTSENRGNW
501: PPLQRQLLHL ERQQTHIMNM LQDFMGGSHD GMISLENRVR GLERIVEEMS REMSIQSGAR GKATASWRSD VDGWDSPNYG PSSRNTQTST RKIRGTGPSE
601: QSGNSRRAWD KSSVAIRLGE GPSARSVWQA SKDEATLEAI RVAGEDCGTS RNRRVSIPEA EAMMDEDDDN RGGQQGDPIW TCWSNSVHAL RVGDTDSAFA
701: EVLSTGDDHL LVKLMDKTGP VLDQLSSDMG NEAIHSIAQF LLDHTLYDIC LSWIQQLLEV SVENGADFMG IPLELKKELL LNLHEALSTT DPPEDWEGLA
801: PDHLLVELAS NWNIEIQHFD T
Arabidopsis Description
TOR1L1TORTIFOLIA1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I6M4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.