Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99353 | Sorghum | cytosol | 89.39 | 90.56 |
| Os09t0560000-01 | Rice | cytosol | 73.11 | 74.43 |
| TraesCS5A01G363500.1 | Wheat | cytosol | 70.05 | 71.65 |
| HORVU5Hr1G089280.1 | Barley | cytosol | 70.17 | 71.34 |
| TraesCS5D01G372700.1 | Wheat | cytosol | 69.58 | 71.17 |
| TraesCS5B01G365600.1 | Wheat | cytosol | 69.34 | 71.01 |
| Zm00001d018800_P001 | Maize | extracellular, mitochondrion | 11.79 | 63.29 |
| GSMUA_Achr9P23120_001 | Banana | mitochondrion | 41.75 | 42.19 |
| GSMUA_Achr4P12500_001 | Banana | mitochondrion | 29.36 | 42.13 |
| VIT_11s0065g00460.t01 | Wine grape | cytosol | 38.21 | 38.99 |
| Solyc07g042580.2.1 | Tomato | cytosol | 35.85 | 36.49 |
| PGSC0003DMT400035319 | Potato | nucleus | 33.73 | 36.02 |
| AT2G07170.1 | Thale cress | cytosol | 34.2 | 35.37 |
| KRH74132 | Soybean | cytosol, endoplasmic reticulum, nucleus | 33.25 | 35.03 |
| CDX78782 | Canola | nucleus | 34.2 | 34.65 |
| CDY38410 | Canola | nucleus | 31.84 | 34.39 |
| Zm00001d013733_P002 | Maize | mitochondrion | 11.08 | 32.53 |
| Zm00001d016462_P001 | Maize | cytosol | 11.56 | 23.11 |
| Zm00001d017987_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 16.63 | 23.04 |
| Zm00001d021641_P002 | Maize | plastid | 23.47 | 21.47 |
| Zm00001d037271_P001 | Maize | cytosol | 14.62 | 20.2 |
| Zm00001d044701_P001 | Maize | cytosol | 11.56 | 20.12 |
| Zm00001d044760_P001 | Maize | cytosol | 14.27 | 19.93 |
| Zm00001d006504_P005 | Maize | plastid | 21.23 | 19.38 |
| Zm00001d017306_P002 | Maize | cytosol | 6.96 | 18.73 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100278719 | MapMan:35.1 | UniProt:A0A096T7A0 | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Cohesin_HEAT | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 | InterPro:IPR011989 |
| ProteinID:ONM56990.1 | PFAM:PF12765 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF5 | SMART:SM01349 | SUPFAM:SSF48371 |
| InterPro:TOG | InterPro:TORTIFOLIA1/SPIRAL2-like | UniParc:UPI0002209442 | EnsemblPlantsGene:Zm00001d021378 | EnsemblPlants:Zm00001d021378_P007 | EnsemblPlants:Zm00001d021378_T007 |
| SEG:seg | : | : | : | : | : |
Description
ARM repeat superfamily protein
Coordinates
chr7:+:150323678..150329166
Molecular Weight (calculated)
93355.1 Da
IEP (calculated)
7.551
GRAVY (calculated)
-0.385
Length
848 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSAVTTKG KAIFELKHKL VQAVNKIADR DTYQIGLDEI EKMADTLAPD MIGPFLSCVI DTDAEQKSAV RKECIKVIGT LARLHGNLLA PHMAKMVSSV
101: VKRLKDTDSV VRDACVDTCG TLAMCARSYG DGGAALVTLV RPLFESLGEQ NRYIQAGAAL CLAKVIDESN YFPGPVLPQM LVRVVKLLKN PHFMAKPAAI
201: DLIRSIIQAE GASTEQALSS ALTSIMDALK STDWNTRKAA SLALSSIAVS SGYLVTSFRT SCLRSLERSK FDKVKPVRDT IIHAIQLWKA IPGSHTPEPS
301: EAGSSTKENY FGDHHDARSI HDGGSRDTSF RRTDHGPSVS VISGSSLSSA KRRSPLSINK VAINNAANLQ RMKTGDWRVE VSVPKQSMIP LVNNDEKGSS
401: KACSLKDTKR NAYESVDVDS KFDYDIVDDK QECSSVSEVA SRSFETKHVT TAQECTEDCD SAEVTEQCPR GRESKSIGST ITDVTTHDTH SCCLNTMNEL
501: ALVRKQLQEM ERKQANFFDL LQEFMASSAE NMSVLNLKVH NLENAADKTV YTITQSESRY HLPGSKHFKN QSVSSLPRLS TSTPRSSMDV NYKPPPISEL
601: KHEKWMRDLP SRGSNMCCKE GADFRKDHVR SKVRKLGPVS LEGNLGRCDP SSARSRTSGV KGTYPVSFTS SCEQSGLRNA LCTSNQPGEF QDTDGMEPAY
701: MEALNCGDYD DLIDLMDRTG PVLEKLSCET TNELLRVIAE QFLNKKFFDL ALPWLQQLAD LSTIYKPTQL FASVRAQKEF LSALEEAATG GSMEPALRIA
801: IAQLGFKLSK AFEVGPCRWT CKTLLCHLDR PDFEIGGEEN LSQNVQRK
101: VKRLKDTDSV VRDACVDTCG TLAMCARSYG DGGAALVTLV RPLFESLGEQ NRYIQAGAAL CLAKVIDESN YFPGPVLPQM LVRVVKLLKN PHFMAKPAAI
201: DLIRSIIQAE GASTEQALSS ALTSIMDALK STDWNTRKAA SLALSSIAVS SGYLVTSFRT SCLRSLERSK FDKVKPVRDT IIHAIQLWKA IPGSHTPEPS
301: EAGSSTKENY FGDHHDARSI HDGGSRDTSF RRTDHGPSVS VISGSSLSSA KRRSPLSINK VAINNAANLQ RMKTGDWRVE VSVPKQSMIP LVNNDEKGSS
401: KACSLKDTKR NAYESVDVDS KFDYDIVDDK QECSSVSEVA SRSFETKHVT TAQECTEDCD SAEVTEQCPR GRESKSIGST ITDVTTHDTH SCCLNTMNEL
501: ALVRKQLQEM ERKQANFFDL LQEFMASSAE NMSVLNLKVH NLENAADKTV YTITQSESRY HLPGSKHFKN QSVSSLPRLS TSTPRSSMDV NYKPPPISEL
601: KHEKWMRDLP SRGSNMCCKE GADFRKDHVR SKVRKLGPVS LEGNLGRCDP SSARSRTSGV KGTYPVSFTS SCEQSGLRNA LCTSNQPGEF QDTDGMEPAY
701: MEALNCGDYD DLIDLMDRTG PVLEKLSCET TNELLRVIAE QFLNKKFFDL ALPWLQQLAD LSTIYKPTQL FASVRAQKEF LSALEEAATG GSMEPALRIA
801: IAQLGFKLSK AFEVGPCRWT CKTLLCHLDR PDFEIGGEEN LSQNVQRK
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Arabidopsis Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.