Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78782 | Canola | nucleus | 72.44 | 70.97 |
| CDY38410 | Canola | nucleus | 65.49 | 68.41 |
| VIT_11s0065g00460.t01 | Wine grape | cytosol | 48.78 | 48.13 |
| PGSC0003DMT400035319 | Potato | nucleus | 39.02 | 40.3 |
| Solyc07g042580.2.1 | Tomato | cytosol | 40.37 | 39.74 |
| KRH74132 | Soybean | cytosol, endoplasmic reticulum, nucleus | 37.2 | 37.89 |
| Zm00001d018800_P001 | Maize | extracellular, mitochondrion | 7.2 | 37.34 |
| GSMUA_Achr4P12500_001 | Banana | mitochondrion | 26.46 | 36.72 |
| GSMUA_Achr9P23120_001 | Banana | mitochondrion | 35.73 | 34.92 |
| Os09t0560000-01 | Rice | cytosol | 35.0 | 34.45 |
| Zm00001d021378_P007 | Maize | cytosol | 35.37 | 34.2 |
| EER99353 | Sorghum | cytosol | 34.51 | 33.81 |
| TraesCS5B01G365600.1 | Wheat | cytosol | 33.66 | 33.33 |
| TraesCS5D01G372700.1 | Wheat | cytosol | 33.66 | 33.29 |
| HORVU5Hr1G089280.1 | Barley | cytosol | 33.78 | 33.21 |
| TraesCS5A01G363500.1 | Wheat | cytosol | 33.54 | 33.17 |
| AT1G59850.1 | Thale cress | plastid | 16.71 | 27.51 |
| AT1G27210.1 | Thale cress | plastid | 19.15 | 25.12 |
| AT4G27060.1 | Thale cress | plastid | 24.39 | 23.15 |
| AT5G62580.1 | Thale cress | cytosol | 17.2 | 22.93 |
| AT1G50890.1 | Thale cress | plastid | 22.93 | 22.9 |
| Zm00001d013733_P002 | Maize | mitochondrion | 7.07 | 20.07 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | EntrezGene:815286 | ProteinID:AAC69120.1 | ProteinID:AEC06037.1 | InterPro:ARM-like |
| InterPro:ARM-type_fold | ArrayExpress:AT2G07170 | EnsemblPlantsGene:AT2G07170 | RefSeq:AT2G07170 | TAIR:AT2G07170 | RefSeq:AT2G07170-TAIR-G |
| EnsemblPlants:AT2G07170.1 | TAIR:AT2G07170.1 | ncoils:Coil | UniProt:F4IK92 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 |
| GO:GO:0008017 | InterPro:HEAT | InterPro:IPR011989 | RefSeq:NP_178730.2 | PFAM:PF02985 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0025022 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF5 | SUPFAM:SSF48371 | InterPro:TORTIFOLIA1/SPIRAL2-like |
| UniParc:UPI00005DC2B2 | SEG:seg | : | : | : | : |
Description
TOR1L2TORTIFOLIA1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:F4IK92]
Coordinates
chr2:+:2975025..2979266
Molecular Weight (calculated)
90660.8 Da
IEP (calculated)
8.149
GRAVY (calculated)
-0.382
Length
820 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTNMQVKGR GGNMKANTNT QQVIFELKKK VVIALNKLAD RDTYQRGVDE LEKTVEHLAP DKVSCFLSCI LDTDSEQKSA VRKECIRLMG TLARFHEGLV
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
101: GPYLGKMVSS IVKRLKDPDS VVRDACIETM GVLASKMSCY EDQNFGVFVS LVKPLFEAIG DQNKYVQSGA ALCLARVIDS SPEAPVAIIQ RMLMRTVKLL
201: NNSHFIAKPA VIELNRSIIL AGGATSKSVL SSAMSSFQDA LKNKDWTTRK AASVALMEIA ATGEKFLGPL KASCICSLES CRFDKVKPVR DSVILALKYW
301: KGVPGSDSPE PSETESSVKE SYNGARESSE LFSTSDFKVK DGMSIKYVTD VTRKKVPVSA RQPPTRYNDD PRKSNQDDWH IEIAVPESSF VSKVDLYNEE
401: SEGSCITKTF AETTNTPEVT YEYIPMKDKA DSYVTGGVNE NDDIKSITVS SSSFRASGMV NPAITSKNYA AEETDLEEQP FSTQVKDRTS LDSFVTVSSS
501: QINHDCCAKI ANEMASVRKQ LSDIENKQSR LIDQLQVFST GIMNNFSVLQ SKVSSLEYAV EGIAQNAALH SDISNSNFVK HNQGSTISPR LSSCTSRTST
601: DIRNRQSTLS TSKYSRENKT HVRSRLNESQ GMEKTRSNPL GKTGQLHTRE DIWNNIGQGR QTLIQTRTSS DSIQSIRQQY AEVMSGTRKP VTGVSCEDVV
701: ESEYLQVLSS GDELALVELL DRTGPVLESM SSQTINEILS ILLSYLLERR FMNSILPWLH QVADLSTTNG ANYLIPSARK RAQVLSAIQE ASGMDFSNLA
801: ERRAVTQIAM KLRKLWGKCS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.