Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56641 | Canola | cytosol | 64.55 | 68.8 |
| CDY00306 | Canola | cytosol | 64.55 | 68.33 |
| Bra035889.1-P | Field mustard | cytosol | 62.44 | 68.33 |
| Bra010100.1-P | Field mustard | cytosol | 63.74 | 67.59 |
| CDY16768 | Canola | cytosol | 59.84 | 66.91 |
| CDX87253 | Canola | cytosol | 62.28 | 64.59 |
| KRH63453 | Soybean | cytosol | 41.63 | 41.16 |
| KRH57001 | Soybean | cytosol | 40.81 | 41.08 |
| VIT_17s0000g07470.t01 | Wine grape | cytosol | 42.6 | 41.07 |
| KRH03379 | Soybean | cytosol, mitochondrion | 40.65 | 40.98 |
| KRH54469 | Soybean | cytosol | 41.46 | 40.93 |
| PGSC0003DMT400063183 | Potato | cytosol | 39.02 | 38.65 |
| Solyc03g113680.2.1 | Tomato | nucleus | 39.02 | 38.34 |
| AT1G59850.1 | Thale cress | plastid | 28.78 | 35.54 |
| AT1G27210.1 | Thale cress | plastid | 33.17 | 32.64 |
| GSMUA_Achr7P02250_001 | Banana | cytosol | 28.46 | 31.53 |
| Os06t0244700-01 | Rice | cytosol | 26.34 | 30.68 |
| Zm00001d017987_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 30.24 | 30.39 |
| Zm00001d037271_P001 | Maize | cytosol | 30.08 | 30.13 |
| EES05553 | Sorghum | cytosol | 30.08 | 30.03 |
| TraesCS7A01G236800.1 | Wheat | cytosol | 30.41 | 29.82 |
| KXG19701 | Sorghum | cytosol | 29.92 | 29.73 |
| TraesCS6A01G311500.1 | Wheat | cytosol | 28.46 | 29.71 |
| Zm00001d044760_P001 | Maize | cytosol | 29.27 | 29.65 |
| TraesCS6D01G290800.1 | Wheat | mitochondrion | 29.92 | 29.63 |
| TraesCS6B01G341700.1 | Wheat | mitochondrion | 29.76 | 29.52 |
| Os02t0739900-01 | Rice | cytosol, mitochondrion | 29.27 | 29.41 |
| HORVU7Hr1G040280.1 | Barley | peroxisome | 29.43 | 29.19 |
| TraesCS7B01G103000.1 | Wheat | plastid | 30.41 | 26.49 |
| TraesCS7D01G199100.1 | Wheat | plastid | 30.24 | 26.35 |
| HORVU6Hr1G076760.1 | Barley | nucleus | 24.39 | 24.35 |
| Zm00001d016462_P001 | Maize | cytosol | 16.26 | 23.58 |
| Zm00001d017306_P002 | Maize | cytosol | 12.03 | 23.49 |
| Zm00001d044701_P001 | Maize | cytosol | 16.59 | 20.94 |
| AT2G07170.1 | Thale cress | cytosol | 22.93 | 17.2 |
| AT4G27060.1 | Thale cress | plastid | 21.3 | 15.16 |
| AT1G50890.1 | Thale cress | plastid | 19.19 | 14.37 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | EntrezGene:836379 | ProteinID:AED97628.1 | ProteinID:ANM70553.1 | InterPro:ARM-like |
| InterPro:ARM-type_fold | ArrayExpress:AT5G62580 | EnsemblPlantsGene:AT5G62580 | RefSeq:AT5G62580 | TAIR:AT5G62580 | RefSeq:AT5G62580-TAIR-G |
| EnsemblPlants:AT5G62580.1 | TAIR:AT5G62580.1 | EMBL:AY069877 | ProteinID:BAB11508.1 | EMBL:BT010752 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 | GO:GO:0008150 | InterPro:IPR011989 | RefSeq:NP_001318866.1 |
| RefSeq:NP_201064.2 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF8 | UniProt:Q6NPR6 | SUPFAM:SSF48371 | InterPro:TORTIFOLIA1/SPIRAL2-like |
| UniParc:UPI000016291E | SEG:seg | : | : | : | : |
Description
TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
Coordinates
chr5:+:25119511..25122578
Molecular Weight (calculated)
66620.4 Da
IEP (calculated)
10.070
GRAVY (calculated)
-0.397
Length
615 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.