Factsheet for Os02t0739900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05553	Sorghum	cytosol	81.37	80.84
TraesCS6A01G311500.1	Wheat	cytosol	76.47	79.46
TraesCS6D01G290800.1	Wheat	mitochondrion	79.74	78.58
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	78.27	78.27
TraesCS6B01G341700.1	Wheat	mitochondrion	79.08	78.06
Zm00001d016462_P001	Maize	cytosol	44.93	64.86
Os06t0244700-01	Rice	cytosol	54.41	63.07
HORVU6Hr1G076760.1	Barley	nucleus	59.48	59.09
Zm00001d044701_P001	Maize	cytosol	39.87	50.1
CDX68449	Canola	cytosol	6.05	50.0
GSMUA_Achr7P02250_001	Banana	cytosol	38.73	42.7
Zm00001d017306_P002	Maize	cytosol	20.26	39.37
KRH03379	Soybean	cytosol, mitochondrion	37.75	37.87
KRH57001	Soybean	cytosol	37.25	37.32
KRH63453	Soybean	cytosol	36.6	36.01
KRH54469	Soybean	cytosol	36.11	35.47
VIT_17s0000g07470.t01	Wine grape	cytosol	36.44	34.95
PGSC0003DMT400063183	Potato	cytosol	35.13	34.62
Bra007853.1-P	Field mustard	nucleus	11.93	34.27
AT1G59850.1	Thale cress	plastid	27.78	34.14
Solyc03g113680.2.1	Tomato	nucleus	34.15	33.39
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	25.0	33.33
CDY24496	Canola	plastid	25.16	33.19
VIT_01s0026g01020.t01	Wine grape	cytosol	34.97	33.18
CDY33611	Canola	cytosol, nucleus, plastid	24.35	32.6
Bra035889.1-P	Field mustard	cytosol	29.74	32.38
CDY00306	Canola	cytosol	30.39	32.01
CDY56641	Canola	cytosol	30.07	31.89
CDY16768	Canola	cytosol	28.59	31.82
Bra010100.1-P	Field mustard	cytosol	29.74	31.38
KRH74717	Soybean	plastid	33.99	31.18
KRH69431	Soybean	endoplasmic reticulum, nucleus	33.33	31.05
CDY62371	Canola	plastid	26.14	30.89
AT1G27210.1	Thale cress	plastid	30.56	29.92
CDY46411	Canola	plastid	29.41	29.7
CDX87253	Canola	cytosol	28.76	29.68
Bra016316.1-P	Field mustard	plastid	29.25	29.54
AT5G62580.1	Thale cress	cytosol	29.41	29.27
CDY16232	Canola	plastid	30.07	29.21
Bra024646.1-P	Field mustard	plastid	30.23	29.0
PGSC0003DMT400058293	Potato	extracellular	29.9	28.5
Solyc05g006550.2.1	Tomato	cytosol	30.39	28.01
CDY14680	Canola	cytosol, plastid	30.56	26.41
Os09t0560000-01	Rice	cytosol	23.04	16.93
Os07t0520400-01	Rice	cytosol, mitochondrion, nucleus, plastid	23.04	15.75

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	EntrezGene:9270619	UniProt:A0A0P0VP92	InterPro:ARM-like	InterPro:ARM-type_fold
ProteinID:BAS80839.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0006508
GO:GO:0008017	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538
InterPro:IPR011989	EnsemblPlantsGene:Os02g0739900	EnsemblPlants:Os02t0739900-01	PANTHER:PTHR31355	PANTHER:PTHR31355:SF16	SUPFAM:SSF48371
InterPro:TORTIFOLIA1/SPIRAL2-like	UniParc:UPI0001C7D8FD	RefSeq:XP_015623384.1	SEG:seg	:	:

Description

Similar to microtubule-associated protein TORTIFOLIA1. (Os02t0739900-01)

Coordinates

chr2:-:30930149..30934255

Molecular Weight (calculated)

65560.5 Da

IEP (calculated)

10.110

GRAVY (calculated)

-0.424

Length

612 amino acids

Sequence
(BLAST)

001: MGTAGRARGG EPLKLRVNRC LLKLSDRDTE AMAAAELEAI ARALAADELG AFVSAVSDAR PTDKTPLRRH ALRALALVAA AHPRDAVAPL VPRILAAALR
101: RVRDQDSSVR AALVDTARAA AAASASASPA LRPLTDALLH EQDQCAQTAA ALATAAAVEA SAPTADLASY IHKLQPRLLK LLRSNAFKAK PALISLIGVS
201: ASAAGAAEVT ASVPCLRDTI ASDDWAARKA AAEALAALAL EHKDLLVSYK SSCITMFEAR RFDKVKIVRD SMNRMIEAWK EIPDVEEDEC SSGAPPASHS
301: QRRSSLAGSA SDGRYPVASS TRRNSLPASR SPPPDASPSV NKRHSSSSAR NKKQSPPSYR KAGQAKNRDY KVDIAVTPDA TPIKVVTEEK LLKGGNVRSR
401: LEARRMLFQD GDDRATKVAG LKAGSRVVPY EEGGNMEEIS EIGGGSERFQ TGYKDEGLSE IRSQLLQIEN QQSSLLDLIQ KFMGKSENGM NSLETRVHGL
501: EMALDEISRD LAASSGRTSN SEAHVNSCCI LNPKFWRRHD ASRYSSSFSV SDGRNSSEGS RTSYKWGRQK FGVQGGFVTN PLAEPNISSA ARTATAQEGR
601: RKDLTLPKSR MG

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.