Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024646.1-P | Field mustard | plastid | 71.52 | 70.06 |
| CDY16232 | Canola | plastid | 70.08 | 69.52 |
| CDY62371 | Canola | plastid | 52.96 | 63.9 |
| CDX68449 | Canola | cytosol | 7.36 | 62.16 |
| CDY14680 | Canola | cytosol, plastid | 69.76 | 61.58 |
| Bra016316.1-P | Field mustard | plastid | 59.36 | 61.22 |
| CDY46411 | Canola | plastid | 58.88 | 60.73 |
| AT1G59850.1 | Thale cress | plastid | 39.36 | 49.4 |
| VIT_01s0026g01020.t01 | Wine grape | cytosol | 43.2 | 41.86 |
| KRH74717 | Soybean | plastid | 43.36 | 40.63 |
| KRH69431 | Soybean | endoplasmic reticulum, nucleus | 42.08 | 40.03 |
| PGSC0003DMT400058293 | Potato | extracellular | 36.96 | 35.98 |
| Solyc05g006550.2.1 | Tomato | cytosol | 37.44 | 35.24 |
| AT5G62580.1 | Thale cress | cytosol | 32.64 | 33.17 |
| GSMUA_Achr7P02250_001 | Banana | cytosol | 27.68 | 31.17 |
| Os06t0244700-01 | Rice | cytosol | 26.08 | 30.87 |
| Zm00001d017987_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 29.92 | 30.56 |
| Os02t0739900-01 | Rice | cytosol, mitochondrion | 29.92 | 30.56 |
| EES05553 | Sorghum | cytosol | 29.92 | 30.36 |
| Zm00001d037271_P001 | Maize | cytosol | 29.76 | 30.29 |
| Zm00001d044760_P001 | Maize | cytosol | 29.28 | 30.15 |
| TraesCS7A01G236800.1 | Wheat | cytosol | 30.08 | 29.98 |
| KXG19701 | Sorghum | cytosol | 29.44 | 29.73 |
| TraesCS6B01G341700.1 | Wheat | mitochondrion | 29.44 | 29.68 |
| HORVU7Hr1G040280.1 | Barley | peroxisome | 29.12 | 29.35 |
| TraesCS6D01G290800.1 | Wheat | mitochondrion | 29.12 | 29.31 |
| TraesCS6A01G311500.1 | Wheat | cytosol | 27.04 | 28.69 |
| TraesCS7D01G199100.1 | Wheat | plastid | 30.4 | 26.91 |
| TraesCS7B01G103000.1 | Wheat | plastid | 30.24 | 26.77 |
| Zm00001d016462_P001 | Maize | cytosol | 16.32 | 24.06 |
| HORVU6Hr1G076760.1 | Barley | nucleus | 22.56 | 22.89 |
| Zm00001d017306_P002 | Maize | cytosol | 11.2 | 22.22 |
| Zm00001d044701_P001 | Maize | cytosol | 16.0 | 20.53 |
| AT2G07170.1 | Thale cress | cytosol | 25.12 | 19.15 |
| AT1G50890.1 | Thale cress | plastid | 23.84 | 18.15 |
| AT4G27060.1 | Thale cress | plastid | 24.0 | 17.36 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | EntrezGene:839610 | ProteinID:AAF79870.1 | ProteinID:AAF99750.1 | ProteinID:AEE30794.1 |
| InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT1G27210 | EnsemblPlantsGene:AT1G27210 | RefSeq:AT1G27210 | TAIR:AT1G27210 |
| RefSeq:AT1G27210-TAIR-G | EnsemblPlants:AT1G27210.1 | TAIR:AT1G27210.1 | EMBL:AY057540 | EMBL:AY140087 | Unigene:At.26316 |
| EMBL:BT008391 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 | InterPro:HEAT |
| InterPro:HEAT_type_2 | InterPro:IPR011989 | InterPro:IPR021133 | RefSeq:NP_564273.1 | PFAM:PF02985 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50077 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF3 | UniProt:Q93ZH1 | SUPFAM:SSF48371 | InterPro:TORTIFOLIA1/SPIRAL2-like |
| UniParc:UPI00000AB08C | SEG:seg | : | : | : | : |
Description
TOR1L4TORTIFOLIA1-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZH1]
Coordinates
chr1:-:9455277..9458176
Molecular Weight (calculated)
67545.6 Da
IEP (calculated)
8.592
GRAVY (calculated)
-0.515
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVHGRFPAS PPISLSPSSS STSPSSQSPS TPPDLKQRVI ACLNKLADRD TLALASAELD SIARNLTHDS FSPFLNCIHN TDSSVKSPVR KQCVALLSVL
101: SRYHGDSLTP HLAKMVSTVI RRLRDPDSSV RSACAVATAD MSAHVTRQPF ASVAKPLIET LIQEGDSNLQ IGAALCLAAS VDAATDPESE QLRKSLPKIG
201: KLLKSDGFKA KAALLSAVGS IITAGGAGTK PVLDWLVPVL IEFLSSEDWA ARKSAAEALG KVATAEDLAS QYKKTCTTAL ESRRFDKVKS VRETMNRALN
301: LWKEVSTDDE ASLSPSRSST DDGNIGCFSS VTRSSTIDVG LKSARPKKVT PIMKRSPSLP VNRSYAATRQ KENLPKRNQG NMTMLVEEAS SVDNKGPHFT
401: PVKKSSEETE EKANSGGPDI IKHTISEKSR EDSKVSSFGG LRSGSRVAPC SDDGDSVKNC KDDVEESKKD SEELSLIREQ LALIENQQSS LLDLLQKFMG
501: TSQSGIQSLE SRVSGLEMAL DEISCDLAVS NGRVPRNSSG CAGDSCSKLP GTEFLSPKFW RKTEERPRNR NTANEMAAYD QGMRESTDTN NGQRGGSVFQ
601: KRSRRDQFQD CMHTTLQKPT TRLST
101: SRYHGDSLTP HLAKMVSTVI RRLRDPDSSV RSACAVATAD MSAHVTRQPF ASVAKPLIET LIQEGDSNLQ IGAALCLAAS VDAATDPESE QLRKSLPKIG
201: KLLKSDGFKA KAALLSAVGS IITAGGAGTK PVLDWLVPVL IEFLSSEDWA ARKSAAEALG KVATAEDLAS QYKKTCTTAL ESRRFDKVKS VRETMNRALN
301: LWKEVSTDDE ASLSPSRSST DDGNIGCFSS VTRSSTIDVG LKSARPKKVT PIMKRSPSLP VNRSYAATRQ KENLPKRNQG NMTMLVEEAS SVDNKGPHFT
401: PVKKSSEETE EKANSGGPDI IKHTISEKSR EDSKVSSFGG LRSGSRVAPC SDDGDSVKNC KDDVEESKKD SEELSLIREQ LALIENQQSS LLDLLQKFMG
501: TSQSGIQSLE SRVSGLEMAL DEISCDLAVS NGRVPRNSSG CAGDSCSKLP GTEFLSPKFW RKTEERPRNR NTANEMAAYD QGMRESTDTN NGQRGGSVFQ
601: KRSRRDQFQD CMHTTLQKPT TRLST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.