Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29609 | Canola | cytosol | 74.3 | 78.91 |
| Bra030470.1-P | Field mustard | cytosol | 72.84 | 77.36 |
| CDY07335 | Canola | cytosol | 68.09 | 67.43 |
| AT4G27060.1 | Thale cress | plastid | 50.67 | 48.15 |
| KRG98830 | Soybean | plastid | 53.96 | 48.0 |
| Solyc10g006350.2.1 | Tomato | plastid | 49.94 | 47.45 |
| PGSC0003DMT400037390 | Potato | plastid | 49.57 | 47.22 |
| KRH46114 | Soybean | plastid | 52.38 | 46.44 |
| VIT_19s0090g00020.t01 | Wine grape | plastid | 52.25 | 45.74 |
| GSMUA_Achr9P02790_001 | Banana | plastid | 39.83 | 43.66 |
| GSMUA_Achr9P11640_001 | Banana | cytosol | 44.46 | 42.39 |
| TraesCS2D01G226900.1 | Wheat | plastid | 40.56 | 37.63 |
| TraesCS2A01G221200.6 | Wheat | plastid | 40.56 | 37.63 |
| HORVU2Hr1G046160.2 | Barley | cytosol, plastid | 31.79 | 37.45 |
| TraesCS2B01G246900.8 | Wheat | plastid | 40.19 | 37.37 |
| Os07t0520400-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 40.56 | 37.21 |
| EER99458 | Sorghum | plastid | 41.29 | 36.77 |
| Zm00001d021641_P002 | Maize | plastid | 39.83 | 35.28 |
| Zm00001d006504_P005 | Maize | plastid | 37.27 | 32.94 |
| AT1G59850.1 | Thale cress | plastid | 16.32 | 26.91 |
| AT1G27210.1 | Thale cress | plastid | 18.15 | 23.84 |
| AT2G07170.1 | Thale cress | cytosol | 22.9 | 22.93 |
| AT5G62580.1 | Thale cress | cytosol | 14.37 | 19.19 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:20.1.5.3 | EntrezGene:841511 | ProteinID:AAG50927.1 | ProteinID:AEE32598.1 | InterPro:ARM-like |
| InterPro:ARM-type_fold | ArrayExpress:AT1G50890 | EnsemblPlantsGene:AT1G50890 | RefSeq:AT1G50890 | TAIR:AT1G50890 | RefSeq:AT1G50890-TAIR-G |
| EnsemblPlants:AT1G50890.1 | TAIR:AT1G50890.1 | Unigene:At.37931 | ncoils:Coil | UniProt:F4I6M4 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005856 | GO:GO:0005874 | GO:GO:0007275 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009653 |
| GO:GO:0009826 | GO:GO:0009987 | GO:GO:0010005 | GO:GO:0010031 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0040007 | InterPro:IPR011989 | RefSeq:NP_175502.2 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31355 | PANTHER:PTHR31355:SF7 |
| SUPFAM:SSF48371 | InterPro:TORTIFOLIA1/SPIRAL2-like | UniParc:UPI0000197052 | SEG:seg | : | : |
Description
TOR1L1TORTIFOLIA1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I6M4]
Coordinates
chr1:-:18862154..18866113
Molecular Weight (calculated)
89950.0 Da
IEP (calculated)
5.203
GRAVY (calculated)
-0.395
Length
821 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSQTASKTS MKPSSNSSAF SVRSSVAVSS HSAMVELKQR ILTSLSRLGD RDTYQIAVDD LEKIVVSVPD SPEILPVLLH CLFDSSSDLK APVKRESIRL
101: LSFLCLSYTD LSFSQLAKII SHIVKRLKDA DNGVRDACRD AIGSLSAQFL KEKEVENGNY VGSSLVGLFA KPLFEAMAEQ NKSLQSGAAI CMGKMIDSAT
201: EPPVAAFQKL CPRISKLLNS PNYITKASLL PVVGSLSQVG AIAPQSLESL LHSIHECLGC TNWVTRKAAA DVLISLAVHS SSLVADKTDS TLTALEACRF
301: DKIKPVRESL SEALNVWKNI AGKGESGTMD DQKDVSSEQC ILERNGETDS VSCEEAGLVM QGSCDGLSSS SDSISKAVLI LRKKAPRLTG KDLNPEFFQK
401: LEKRGSGDMP VEVILPSRQK NSSNSNTEDE SDANTSVLRS RSNGLCRTAG VHTKQRHFGD FAREKWVDER MNGGESRLRA FDGDHTEVIQ ADTSENRGNW
501: PPLQRQLLHL ERQQTHIMNM LQDFMGGSHD GMISLENRVR GLERIVEEMS REMSIQSGAR GKATASWRSD VDGWDSPNYG PSSRNTQTST RKIRGTGPSE
601: QSGNSRRAWD KSSVAIRLGE GPSARSVWQA SKDEATLEAI RVAGEDCGTS RNRRVSIPEA EAMMDEDDDN RGGQQGDPIW TCWSNSVHAL RVGDTDSAFA
701: EVLSTGDDHL LVKLMDKTGP VLDQLSSDMG NEAIHSIAQF LLDHTLYDIC LSWIQQLLEV SVENGADFMG IPLELKKELL LNLHEALSTT DPPEDWEGLA
801: PDHLLVELAS NWNIEIQHFD T
101: LSFLCLSYTD LSFSQLAKII SHIVKRLKDA DNGVRDACRD AIGSLSAQFL KEKEVENGNY VGSSLVGLFA KPLFEAMAEQ NKSLQSGAAI CMGKMIDSAT
201: EPPVAAFQKL CPRISKLLNS PNYITKASLL PVVGSLSQVG AIAPQSLESL LHSIHECLGC TNWVTRKAAA DVLISLAVHS SSLVADKTDS TLTALEACRF
301: DKIKPVRESL SEALNVWKNI AGKGESGTMD DQKDVSSEQC ILERNGETDS VSCEEAGLVM QGSCDGLSSS SDSISKAVLI LRKKAPRLTG KDLNPEFFQK
401: LEKRGSGDMP VEVILPSRQK NSSNSNTEDE SDANTSVLRS RSNGLCRTAG VHTKQRHFGD FAREKWVDER MNGGESRLRA FDGDHTEVIQ ADTSENRGNW
501: PPLQRQLLHL ERQQTHIMNM LQDFMGGSHD GMISLENRVR GLERIVEEMS REMSIQSGAR GKATASWRSD VDGWDSPNYG PSSRNTQTST RKIRGTGPSE
601: QSGNSRRAWD KSSVAIRLGE GPSARSVWQA SKDEATLEAI RVAGEDCGTS RNRRVSIPEA EAMMDEDDDN RGGQQGDPIW TCWSNSVHAL RVGDTDSAFA
701: EVLSTGDDHL LVKLMDKTGP VLDQLSSDMG NEAIHSIAQF LLDHTLYDIC LSWIQQLLEV SVENGADFMG IPLELKKELL LNLHEALSTT DPPEDWEGLA
801: PDHLLVELAS NWNIEIQHFD T
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.