Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24496 | Canola | plastid | 65.06 | 69.83 |
| Bra035420.1-P | Field mustard | cytosol, nucleus, plastid | 64.26 | 69.72 |
| CDY33611 | Canola | cytosol, nucleus, plastid | 62.65 | 68.27 |
| Bra007853.1-P | Field mustard | nucleus | 22.49 | 52.58 |
| AT1G27210.1 | Thale cress | plastid | 49.4 | 39.36 |
| VIT_01s0026g01020.t01 | Wine grape | cytosol | 45.58 | 35.19 |
| KRH74717 | Soybean | plastid | 44.18 | 32.98 |
| KRH69431 | Soybean | endoplasmic reticulum, nucleus | 43.37 | 32.88 |
| PGSC0003DMT400058293 | Potato | extracellular | 39.76 | 30.84 |
| Solyc05g006550.2.1 | Tomato | cytosol | 39.96 | 29.97 |
| AT5G62580.1 | Thale cress | cytosol | 35.54 | 28.78 |
| Zm00001d037271_P001 | Maize | cytosol | 34.74 | 28.18 |
| Os02t0739900-01 | Rice | cytosol, mitochondrion | 34.14 | 27.78 |
| EES05553 | Sorghum | cytosol | 34.34 | 27.76 |
| KXG19701 | Sorghum | cytosol | 34.14 | 27.46 |
| Zm00001d017987_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 33.73 | 27.45 |
| TraesCS7A01G236800.1 | Wheat | cytosol | 34.34 | 27.27 |
| TraesCS6B01G341700.1 | Wheat | mitochondrion | 33.73 | 27.1 |
| TraesCS6D01G290800.1 | Wheat | mitochondrion | 33.73 | 27.05 |
| Zm00001d044760_P001 | Maize | cytosol | 32.93 | 27.02 |
| HORVU7Hr1G040280.1 | Barley | peroxisome | 33.13 | 26.61 |
| TraesCS6A01G311500.1 | Wheat | cytosol | 31.12 | 26.32 |
| GSMUA_Achr7P02250_001 | Banana | cytosol | 29.32 | 26.31 |
| Os06t0244700-01 | Rice | cytosol | 26.91 | 25.38 |
| Zm00001d016462_P001 | Maize | cytosol | 21.29 | 25.0 |
| TraesCS7B01G103000.1 | Wheat | plastid | 34.74 | 24.5 |
| TraesCS7D01G199100.1 | Wheat | plastid | 34.14 | 24.08 |
| Zm00001d017306_P002 | Maize | cytosol | 13.45 | 21.27 |
| Zm00001d044701_P001 | Maize | cytosol | 20.48 | 20.94 |
| HORVU6Hr1G076760.1 | Barley | nucleus | 25.3 | 20.45 |
| AT2G07170.1 | Thale cress | cytosol | 27.51 | 16.71 |
| AT1G50890.1 | Thale cress | plastid | 26.91 | 16.32 |
| AT4G27060.1 | Thale cress | plastid | 27.71 | 15.97 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | EntrezGene:842279 | ProteinID:AAD39327.1 | ProteinID:AEE33628.1 | InterPro:ARM-like |
| InterPro:ARM-type_fold | ArrayExpress:AT1G59850 | EnsemblPlantsGene:AT1G59850 | RefSeq:AT1G59850 | TAIR:AT1G59850 | RefSeq:AT1G59850-TAIR-G |
| EnsemblPlants:AT1G59850.1 | TAIR:AT1G59850.1 | Unigene:At.66816 | InterPro:Cohesin_HEAT | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 |
| GO:GO:0008017 | GO:GO:0008150 | InterPro:IPR011989 | RefSeq:NP_176194.1 | PFAM:PF12765 | PO:PO:0000293 |
| PANTHER:PTHR31355 | PANTHER:PTHR31355:SF3 | UniProt:Q9XIE4 | SUPFAM:SSF48371 | InterPro:TORTIFOLIA1/SPIRAL2-like | UniParc:UPI00000A4876 |
| SEG:seg | : | : | : | : | : |
Description
TOR1L5TORTIFOLIA1-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE4]
Coordinates
chr1:-:22028509..22030261
Molecular Weight (calculated)
54051.2 Da
IEP (calculated)
8.927
GRAVY (calculated)
-0.403
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSVQIRSSP SHSQPAMTVT DLKQRVIACL NRLSDRDTLA LAAAELDSIA LNLSPETFSL FINCLQSTDS SAKSPVRKHC VSLLSVLSRS HGDSLAPHLS
101: KMVSTVLRRL RDPDSSVRAA CVAASVDMTT NITGQPFSIL FGPMIETVIH DCDPNAQISA AMCLAAAVDA ADEPDVEQLQ KALPKIGKLL KSEGFKAKAE
201: LLGAIGTVIG AVGGRNSEKA VLDWLLPNVS EFLSSDDWRA RKAAAEAMAR VAMVEEELAP LYKKTCLGIL ESRRFDKVKL VRETMNRTLG LWKQLEGDST
301: EVSESSSSSK SASSGLSATS GKRSNTLKGK DRNLNTPLSS KSNDVEPLDR GDTPKDVEQE AVVSKEKRNR STLGAKRVLF PAKMHKVKEN GSNKSQVVQS
401: SDEESPKTDS GSSSSSQAKS NAEELSLIRH QITQIEKQQS SLLDLFQKFM ESSHNGMQSL ERRVRGLETS FSVISTDLLV SRSITQNGNH KRNACRQN
101: KMVSTVLRRL RDPDSSVRAA CVAASVDMTT NITGQPFSIL FGPMIETVIH DCDPNAQISA AMCLAAAVDA ADEPDVEQLQ KALPKIGKLL KSEGFKAKAE
201: LLGAIGTVIG AVGGRNSEKA VLDWLLPNVS EFLSSDDWRA RKAAAEAMAR VAMVEEELAP LYKKTCLGIL ESRRFDKVKL VRETMNRTLG LWKQLEGDST
301: EVSESSSSSK SASSGLSATS GKRSNTLKGK DRNLNTPLSS KSNDVEPLDR GDTPKDVEQE AVVSKEKRNR STLGAKRVLF PAKMHKVKEN GSNKSQVVQS
401: SDEESPKTDS GSSSSSQAKS NAEELSLIRH QITQIEKQQS SLLDLFQKFM ESSHNGMQSL ERRVRGLETS FSVISTDLLV SRSITQNGNH KRNACRQN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.