Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G226900.1 | Wheat | plastid | 98.76 | 98.76 |
| HORVU2Hr1G046160.2 | Barley | cytosol, plastid | 75.48 | 95.84 |
| TraesCS2B01G246900.8 | Wheat | plastid | 93.79 | 94.0 |
| Os07t0520400-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 78.53 | 77.65 |
| EER99458 | Sorghum | plastid | 79.55 | 76.36 |
| Zm00001d021641_P002 | Maize | plastid | 75.93 | 72.49 |
| Zm00001d006504_P005 | Maize | plastid | 70.17 | 66.85 |
| GSMUA_Achr9P11640_001 | Banana | cytosol | 54.69 | 56.21 |
| GSMUA_Achr9P02790_001 | Banana | plastid | 42.82 | 50.6 |
| PGSC0003DMT400037390 | Potato | plastid | 47.12 | 48.38 |
| VIT_19s0090g00020.t01 | Wine grape | plastid | 50.62 | 47.76 |
| Solyc10g006350.2.1 | Tomato | plastid | 45.99 | 47.11 |
| KRG98830 | Soybean | plastid | 47.91 | 45.94 |
| KRH46114 | Soybean | plastid | 46.67 | 44.6 |
| Bra030470.1-P | Field mustard | cytosol | 36.72 | 42.04 |
| CDY29609 | Canola | cytosol | 36.5 | 41.79 |
| CDY29271 | Canola | plastid | 39.55 | 40.65 |
| AT1G50890.1 | Thale cress | plastid | 37.63 | 40.56 |
| AT4G27060.1 | Thale cress | plastid | 39.1 | 40.05 |
| CDY07335 | Canola | cytosol | 36.05 | 38.48 |
| CDX89282 | Canola | plastid | 39.1 | 36.38 |
| Bra026382.1-P | Field mustard | plastid | 38.64 | 34.69 |
| TraesCS5A01G363500.1 | Wheat | cytosol | 23.39 | 24.97 |
| TraesCS7A01G236800.1 | Wheat | cytosol | 15.82 | 22.33 |
| TraesCS6A01G311500.1 | Wheat | cytosol | 14.24 | 21.39 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G221200.6 | EnsemblPlantsGene:TraesCS2A01G221200 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008017 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:TORTIFOLIA1/SPIRAL2-like | ncoils:Coil | PANTHER:PTHR31355 |
| PANTHER:PTHR31355:SF7 | SEG:seg | SUPFAM:SSF48371 | MapMan:20.1.5.3 | : | : |
Description
No Description!
Coordinates
chr2A:+:210465808..210472710
Molecular Weight (calculated)
94712.7 Da
IEP (calculated)
5.279
GRAVY (calculated)
-0.467
Length
885 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAVSKSAT KSHPRSPTTA QPPNPASAAA AAGAAPSKSA AMAELKSRVL SALAKLSDRD THHIAVEELD RFIRSPPSPD AVPMLLHALA SDTQGLASPA
101: RRESIRLLAT LCAAHPDAAA PHLLKVMAHL SRRLKDTASD SSVRDACRDA AGQLAAVYLR PLAASAAGEA GNGTVALFVK PLFEVMGEQS KTVQSGAAAC
201: LAKTVEGAGP GPGVLGMFGK LGSRVFKLVG GQGVQAKGSL LNVIGSLAQV GAISPQNMQQ TLQSIRDCLE NSDWATRKAA ADTLCVLATY SGHLIGDGAA
301: PTIAALEACR FDKVRPVRDS VIDAVQLWKQ LTGEDTNEDG KTKEPTGSET KLDSPSNNEK AKGSSIAEKA AVLLKKRPTL TDRELNPEFF QKLETRTTDD
401: LAVEVVVPRK TLQSHLQSED DPEEVDGDPV GAANSNGSAD DEGSLTQVRA SSSFQSVRNK WAGQRGNRNK DTKARPSDVE DRCETSAKES APMTIPGDGP
501: FINNKTNWLV IQKQLSQLER QQTSLMNMLQ DFMGGSHDSM VTLENRVRGL ERVVEEMARD ISLSSGRRGG GSTLGFDSSP GRSSAKYNGF HEYSNSKFGR
601: GGDGRIGFAD RYFSADGMAS GVRSPSWRPD SEQWDSYAYS GSRSGMNSRR GLDSFSSDTR VPRNGNDQAG PRRGWDKGQG PFRFGEGPSA RSAWRASKDE
701: ATLEAIRVAG EDNGSSRAAA RVAIPELDGE TLNDDNQGDG RGPLWESWTR AMDAIHVGDM DSAYAEVLST GDAELLVKLM EQTGPVVDQL SNEVSNEVLH
801: AVGQFLVEES FYDIALSWLQ QLTDLVMENG SDYLGIPRDA KNDLLFGLHE ATAIELPDDW EGATPVQIMK QLASSWHIDL QQLIN
101: RRESIRLLAT LCAAHPDAAA PHLLKVMAHL SRRLKDTASD SSVRDACRDA AGQLAAVYLR PLAASAAGEA GNGTVALFVK PLFEVMGEQS KTVQSGAAAC
201: LAKTVEGAGP GPGVLGMFGK LGSRVFKLVG GQGVQAKGSL LNVIGSLAQV GAISPQNMQQ TLQSIRDCLE NSDWATRKAA ADTLCVLATY SGHLIGDGAA
301: PTIAALEACR FDKVRPVRDS VIDAVQLWKQ LTGEDTNEDG KTKEPTGSET KLDSPSNNEK AKGSSIAEKA AVLLKKRPTL TDRELNPEFF QKLETRTTDD
401: LAVEVVVPRK TLQSHLQSED DPEEVDGDPV GAANSNGSAD DEGSLTQVRA SSSFQSVRNK WAGQRGNRNK DTKARPSDVE DRCETSAKES APMTIPGDGP
501: FINNKTNWLV IQKQLSQLER QQTSLMNMLQ DFMGGSHDSM VTLENRVRGL ERVVEEMARD ISLSSGRRGG GSTLGFDSSP GRSSAKYNGF HEYSNSKFGR
601: GGDGRIGFAD RYFSADGMAS GVRSPSWRPD SEQWDSYAYS GSRSGMNSRR GLDSFSSDTR VPRNGNDQAG PRRGWDKGQG PFRFGEGPSA RSAWRASKDE
701: ATLEAIRVAG EDNGSSRAAA RVAIPELDGE TLNDDNQGDG RGPLWESWTR AMDAIHVGDM DSAYAEVLST GDAELLVKLM EQTGPVVDQL SNEVSNEVLH
801: AVGQFLVEES FYDIALSWLQ QLTDLVMENG SDYLGIPRDA KNDLLFGLHE ATAIELPDDW EGATPVQIMK QLASSWHIDL QQLIN
001: MRSQTASKTS MKPSSNSSAF SVRSSVAVSS HSAMVELKQR ILTSLSRLGD RDTYQIAVDD LEKIVVSVPD SPEILPVLLH CLFDSSSDLK APVKRESIRL
101: LSFLCLSYTD LSFSQLAKII SHIVKRLKDA DNGVRDACRD AIGSLSAQFL KEKEVENGNY VGSSLVGLFA KPLFEAMAEQ NKSLQSGAAI CMGKMIDSAT
201: EPPVAAFQKL CPRISKLLNS PNYITKASLL PVVGSLSQVG AIAPQSLESL LHSIHECLGC TNWVTRKAAA DVLISLAVHS SSLVADKTDS TLTALEACRF
301: DKIKPVRESL SEALNVWKNI AGKGESGTMD DQKDVSSEQC ILERNGETDS VSCEEAGLVM QGSCDGLSSS SDSISKAVLI LRKKAPRLTG KDLNPEFFQK
401: LEKRGSGDMP VEVILPSRQK NSSNSNTEDE SDANTSVLRS RSNGLCRTAG VHTKQRHFGD FAREKWVDER MNGGESRLRA FDGDHTEVIQ ADTSENRGNW
501: PPLQRQLLHL ERQQTHIMNM LQDFMGGSHD GMISLENRVR GLERIVEEMS REMSIQSGAR GKATASWRSD VDGWDSPNYG PSSRNTQTST RKIRGTGPSE
601: QSGNSRRAWD KSSVAIRLGE GPSARSVWQA SKDEATLEAI RVAGEDCGTS RNRRVSIPEA EAMMDEDDDN RGGQQGDPIW TCWSNSVHAL RVGDTDSAFA
701: EVLSTGDDHL LVKLMDKTGP VLDQLSSDMG NEAIHSIAQF LLDHTLYDIC LSWIQQLLEV SVENGADFMG IPLELKKELL LNLHEALSTT DPPEDWEGLA
801: PDHLLVELAS NWNIEIQHFD T
101: LSFLCLSYTD LSFSQLAKII SHIVKRLKDA DNGVRDACRD AIGSLSAQFL KEKEVENGNY VGSSLVGLFA KPLFEAMAEQ NKSLQSGAAI CMGKMIDSAT
201: EPPVAAFQKL CPRISKLLNS PNYITKASLL PVVGSLSQVG AIAPQSLESL LHSIHECLGC TNWVTRKAAA DVLISLAVHS SSLVADKTDS TLTALEACRF
301: DKIKPVRESL SEALNVWKNI AGKGESGTMD DQKDVSSEQC ILERNGETDS VSCEEAGLVM QGSCDGLSSS SDSISKAVLI LRKKAPRLTG KDLNPEFFQK
401: LEKRGSGDMP VEVILPSRQK NSSNSNTEDE SDANTSVLRS RSNGLCRTAG VHTKQRHFGD FAREKWVDER MNGGESRLRA FDGDHTEVIQ ADTSENRGNW
501: PPLQRQLLHL ERQQTHIMNM LQDFMGGSHD GMISLENRVR GLERIVEEMS REMSIQSGAR GKATASWRSD VDGWDSPNYG PSSRNTQTST RKIRGTGPSE
601: QSGNSRRAWD KSSVAIRLGE GPSARSVWQA SKDEATLEAI RVAGEDCGTS RNRRVSIPEA EAMMDEDDDN RGGQQGDPIW TCWSNSVHAL RVGDTDSAFA
701: EVLSTGDDHL LVKLMDKTGP VLDQLSSDMG NEAIHSIAQF LLDHTLYDIC LSWIQQLLEV SVENGADFMG IPLELKKELL LNLHEALSTT DPPEDWEGLA
801: PDHLLVELAS NWNIEIQHFD T
Arabidopsis Description
TOR1L1TORTIFOLIA1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I6M4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.