Factsheet for Bra035889.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16768	Canola	cytosol	92.17	94.18
Bra010100.1-P	Field mustard	cytosol	71.71	69.48
AT5G62580.1	Thale cress	cytosol	68.33	62.44
KRH57001	Soybean	cytosol	45.55	41.9
KRH03379	Soybean	cytosol, mitochondrion	45.2	41.64
KRH54469	Soybean	cytosol	45.37	40.93
VIT_17s0000g07470.t01	Wine grape	cytosol	45.55	40.13
KRH63453	Soybean	cytosol	44.31	40.03
PGSC0003DMT400063183	Potato	cytosol	43.95	39.77
Solyc03g113680.2.1	Tomato	nucleus	42.88	38.5
Bra035420.1-P	Field mustard	cytosol, nucleus, plastid	30.25	37.04
Bra016316.1-P	Field mustard	plastid	36.3	33.66
Bra024646.1-P	Field mustard	plastid	36.65	32.29
TraesCS7A01G236800.1	Wheat	cytosol	35.41	31.74
HORVU7Hr1G040280.1	Barley	peroxisome	34.34	31.13
Os06t0244700-01	Rice	cytosol	28.65	30.49
Zm00001d037271_P001	Maize	cytosol	33.1	30.29
Zm00001d044760_P001	Maize	cytosol	32.56	30.15
GSMUA_Achr7P02250_001	Banana	cytosol	29.72	30.09
Zm00001d017987_P003	Maize	cytosol, mitochondrion, nucleus, plastid	32.74	30.07
TraesCS6A01G311500.1	Wheat	cytosol	31.32	29.88
EES05553	Sorghum	cytosol	32.74	29.87
TraesCS6D01G290800.1	Wheat	mitochondrion	32.92	29.79
Os02t0739900-01	Rice	cytosol, mitochondrion	32.38	29.74
KXG19701	Sorghum	cytosol	32.74	29.73
TraesCS6B01G341700.1	Wheat	mitochondrion	32.74	29.68
TraesCS7B01G103000.1	Wheat	plastid	35.59	28.33
Bra007853.1-P	Field mustard	nucleus	10.68	28.17
TraesCS7D01G199100.1	Wheat	plastid	35.05	27.9
Zm00001d017306_P002	Maize	cytosol	13.52	24.13
Zm00001d016462_P001	Maize	cytosol	17.97	23.82
HORVU6Hr1G076760.1	Barley	nucleus	25.44	23.21
Zm00001d044701_P001	Maize	cytosol	18.68	21.56
Bra030470.1-P	Field mustard	cytosol	20.46	14.88
Bra026382.1-P	Field mustard	plastid	25.44	14.5

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra035889	EnsemblPlants:Bra035889.1
EnsemblPlants:Bra035889.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0008017	InterPro:HEAT	InterPro:IPR011989
UniProt:M4F489	PFAM:PF02985	PANTHER:PTHR31355	PANTHER:PTHR31355:SF8	SUPFAM:SSF48371	InterPro:TORTIFOLIA1/SPIRAL2-like
UniParc:UPI000254209D	SEG:seg	:	:	:	:

Description

AT5G62580 (E=9e-093) | binding

Coordinates

chrA09:+:3072864..3074874

Molecular Weight (calculated)

60749.5 Da

IEP (calculated)

9.583

GRAVY (calculated)

-0.386

Length

562 amino acids

Sequence
(BLAST)

001: MEKSSKQKMS ELLTKLGDRD TFTMAAKELD LMARNIDPTS GNLQSFISVV LSTDAGDKPA VRKHCIHLLA VLSVSLPPNS LSPHLSKILS RVTRRLRDPD
101: SSVRSACVAA VSAIASRTTK PPFGSAFVKP LSEALFTEQE VNAQIGAGLC LAAAIDAAED PDPVRLGTTL LPRLEKLVKC NAFKAKPAGV VVIGSVIGAG
201: GVSGAAGGLK GLVDCLVSVL SSEDWAARKA AAEALGRLAT VERNGLGEFK AKCLKIFESK RYDKVKTVRE VMNEMMEAWT QVPDLSEEAS PPRSNASSKG
301: SGVASTPAKS RTREVNRSTP PGSSIATVAR RRTNVRSSDQ KKTSSVPSHT KLNVRRRLEL NAGGGASVLC GEPLEEEHHH HNENTKEADH SNHEKMQSLT
401: GDHVLSENQN SSNNCKGLED MSLIRSQLVQ IEQQQSNLMD LLQRFVGSSQ HGMISLETRV QGLEIALDEI SYDLAVSNGR MSNGSSRNNC CLIPPGSFIR
501: SKFWKKPDSM YSASRLVTYR NRNAQTMWMQ NSTQRFNGPA GFIVNPLAEI RPDNGSAGMP HN

Best Arabidopsis Sequence Match ( AT5G62580.1 )
(BLAST)

001: MATKNSKQNM SVLLTKLGDR DTFTMAAREL DLMARQIDPS SSSGNLQSFI SVILSVDTGD KPAVRKHCIH LLAVLSVSLP LNSLSPFLSK ILTRITRRLR
101: DPDSSIRSTC VAAVSAISSR TTKPPFYSAF MKPLADTLFT EQEVNAQIGA ALCLAAAIDS ASDPDPVRLG QTLLPRLEKL VKCNAFKAKS AGVVVIGSVI
201: GAGGLSGTSV SSGGLKGLVD CLLSFLVSED WAARKAAAEA LGRLATMERN ELGEFKAKCL KIFESRKYDK VKAVREVMNQ MMEAWKQVPD LSEEVSPPRS
301: NASSKGDASD GRYPSGSRVG STPAKSRTHL VNRSTPPGSS LATTARKQAN RKSIDQKKTS LTASLTKPNV RRRLEWKAGG ASIPTGVSLE DEQHCDHDEN
401: AKETSHSSHN TVQKLGGVSS SLNGNIPPSG ATMVTGHHVL SENPNSNNCK GLEDISLIRN QLVQIEQQQA NLMDLLQRFV GSSQHGMRGL ETRVHGLELA
501: LDEISYDLAV SNGRMSNGSS RNNCCLLPSG SFIKSKFWKK HDSKYSASRM STYRNRNAET TEIQNSRHRF NGSPGFIVNP LAEIRPDNDL QVCLTIEGRR
601: ETKPSKASET LKTTV

Arabidopsis Description

TOR1L3TORTIFOLIA1-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.