Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- extracellular 1
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g005190.1.1 | Tomato | plastid | 93.39 | 93.63 |
| PGSC0003DMT400036150 | Potato | mitochondrion, plastid | 73.02 | 73.99 |
| PGSC0003DMT400036153 | Potato | mitochondrion, plastid | 71.69 | 72.65 |
| PGSC0003DMT400013180 | Potato | mitochondrion | 49.47 | 47.58 |
| PGSC0003DMT400039957 | Potato | mitochondrion | 64.29 | 46.82 |
| PGSC0003DMT400096525 | Potato | mitochondrion | 20.37 | 41.85 |
| PGSC0003DMT400087322 | Potato | cytosol | 30.42 | 41.07 |
| PGSC0003DMT400049861 | Potato | cytosol, peroxisome, plastid | 18.78 | 40.34 |
| PGSC0003DMT400021083 | Potato | cytosol | 32.28 | 38.85 |
| PGSC0003DMT400004514 | Potato | nucleus | 32.01 | 37.81 |
| PGSC0003DMT400030602 | Potato | cytosol | 8.2 | 36.47 |
| PGSC0003DMT400095232 | Potato | cytosol, peroxisome, plastid | 12.7 | 35.29 |
| PGSC0003DMT400049848 | Potato | cytosol | 28.04 | 33.97 |
| PGSC0003DMT400052991 | Potato | plastid | 25.13 | 31.05 |
| PGSC0003DMT400032725 | Potato | nucleus | 28.31 | 11.19 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400002811 | EnsemblPlantsGene:PGSC0003DMG400001094 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 | InterPro:IPR001932 |
| InterPro:IPR036457 | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | PANTHER:PTHR12320 |
| PANTHER:PTHR12320:SF16 | PFAM:PF07228 | PFscan:PS51746 | PGSC:PGSC0003DMG400001094 | SEG:seg | SMART:SM00331 |
| SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0002960E69 | UniProt:M0ZKQ1 | MapMan:35.1 | : |
Description
Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400001094]
Coordinates
chr12:-:8510475..8512083
Molecular Weight (calculated)
40405.6 Da
IEP (calculated)
7.000
GRAVY (calculated)
-0.185
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVCGSRTSH IGHFVGNMAA RRLHYGLAVN NSSVSYSNRS IENVRKANIS LRNKGQPHNF MLSHYFTTSV AKRKGHYSWY EGFGLEGFRV LSLARFSSGT
101: TAPGSLSSDN TKGKEQTVST VDSSEGKIHL KLNSGSFYLP HPAKAKTGGE DAHFICDPAQ AIGVADGVGG WADLGIDAGE YARELMSNCM SVIQEEPKNS
201: VDLIRVLEKA YMRTKAKGSS TACIVALTDE GLYAVNLGDS GFLLVRHGSL IFKSPVQQHG FNFPYQLEGS SAGDSPSLAQ VFKITVAPGD VVVVGTDGLF
301: DNLYDADITE VVVHAVEAGL APQMTAQKIA ALAQQRAMDT TKPSPFSDAA KEAGFEYHGG KLDDITVVVS YVTNNANP
101: TAPGSLSSDN TKGKEQTVST VDSSEGKIHL KLNSGSFYLP HPAKAKTGGE DAHFICDPAQ AIGVADGVGG WADLGIDAGE YARELMSNCM SVIQEEPKNS
201: VDLIRVLEKA YMRTKAKGSS TACIVALTDE GLYAVNLGDS GFLLVRHGSL IFKSPVQQHG FNFPYQLEGS SAGDSPSLAQ VFKITVAPGD VVVVGTDGLF
301: DNLYDADITE VVVHAVEAGL APQMTAQKIA ALAQQRAMDT TKPSPFSDAA KEAGFEYHGG KLDDITVVVS YVTNNANP
001: MADHLILSLQ APPFLIFPCS LHRSWRFPGG IRYSVPEFRL SSQLQLANSI SPSKSSASSS SPPENSAPEK FDLVSSTQLK DGSHVFRFGD ASEIEKYLEA
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST
101: EEKARCVEVE TQNAKIAEEA SEVSRKQKKL VSSIIETSTE KEETAAPSDL SNVIKIKDRK RVRSPTKKKK ETVNVSRSED KIDAKSASVS NLSSIVSVAE
201: AIPISSTEEE AVVEKEITAK SYNVEPLSSE AMKKVSVNKI GDCETNGYQE NRMEVQARPS LSTQQEITPV STIEIDDNLD VTEKPIEAEE NLVAEPTATD
301: DLSPDELLST SEATHRSVDE IAQKPVIDTS EENLLNTFEA EENPVVEPTA TAAVSSDELI STSEATRHSV DEIAQKPIID TSEKNPMETF VEPEAVHSSV
401: DESTEKLVVV TSDVENDGEN VASTTEDEIT VRDTITDSGS ISNNDDTKVE DLQLPVPETA SLEPIKAASG REELVSKAFY LDSGFASLQS PFKALAGRED
501: AYFISHHNWI GIADGVSQWS FEGINKGMYA QELMSNCEKI ISNETAKISD PVQVLHRSVN ETKSSGSSTA LIAHLDNNEL HIANIGDSGF MVIRDGTVLQ
601: NSSPMFHHFC FPLHITQGCD VLKLAEVYHV NLEEGDVVIA ATDGLFDNLY EKEIVSIVCG SLKQSLEPQK IAELVAAKAQ EVGRSKTERT PFADAAKEEG
701: YNGHKGGKLD AVTVIISFVK IVST
Arabidopsis Description
Probable protein phosphatase 2C 62 [Source:UniProtKB/Swiss-Prot;Acc:Q93V88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.