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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • nucleus 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_05s0020g02150.t01 Wine grape cytosol 72.46 47.17
PGSC0003DMT400058536 Potato cytosol 71.01 46.23
OQU92761 Sorghum cytosol, plastid 71.01 44.55
AT3G06310.1 Thale cress cytosol 68.12 43.52
TraesCS4D01G193300.1 Wheat unclear 68.12 42.73
TraesCS4A01G111800.1 Wheat cytosol, plastid 68.12 42.73
AT5G18800.2 Thale cress cytosol 65.22 42.45
Bra002186.1-P Field mustard cytosol 65.22 42.45
Bra023693.1-P Field mustard cytosol 65.22 42.45
CDX70852 Canola cytosol 65.22 42.45
CDX88910 Canola cytosol 65.22 42.45
CDX92580 Canola cytosol 65.22 42.45
CDY02602 Canola cytosol 65.22 42.45
CDY47183 Canola cytosol 65.22 42.45
GSMUA_Achr6P08740_001 Banana cytosol 65.22 42.06
Os03t0295500-01 Rice mitochondrion 66.67 41.82
Zm00001d028773_P002 Maize cytosol, plastid 69.57 41.38
KRH76302 Soybean cytosol 62.32 40.57
CDY13921 Canola cytosol 62.32 40.57
Zm00001d047720_P003 Maize cytosol 68.12 40.52
KRH65238 Soybean cytosol 60.87 39.62
GSMUA_Achr3P17940_001 Banana mitochondrion 60.87 39.25
Bra006481.1-P Field mustard mitochondrion 65.22 33.58
HORVU4Hr1G055850.1 Barley cytosol 68.12 29.38
GSMUA_Achr7P18280_001 Banana cytosol 26.09 26.47
Protein Annotations
EnsemblPlants:PGSC0003DMT400032530EnsemblPlantsGene:PGSC0003DMG400012496InterPro:CHCHPANTHER:PTHR13344PANTHER:PTHR13344:SF2PFAM:PF06747
PFscan:PS51808PGSC:PGSC0003DMG400012496UniParc:UPI0002969868UniProt:M1AXL0MapMan:2.4.1.4.1.4:
Description
NADH-ubiquinone oxidoreductase 19 kDa subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400012496]
Coordinates
chr8:-:116179..118220
Molecular Weight (calculated)
8027.7 Da
IEP (calculated)
5.083
GRAVY (calculated)
-0.583
Length
69 amino acids
Sequence
(BLAST)
1: MAFLRWEKLD PNPEKCTGKG REVNRCVLSL LCVGCTKEMD AYAGCMYYNT NEFNMCRKEQ KEFEEACPC
Best Arabidopsis Sequence Match ( AT3G06310.1 )
(BLAST)
001: MEANAAVDGT GNPIPTSAVL TASAKHIGIR CMPENMAFLK CKKNDPNPEK CLEKGRDVTR CVLGLLKDLH QRCPKEMDAY VGCMYYYTNE FELCRKEQEA
101: FEKVCPLK
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A [Source:UniProtKB/Swiss-Prot;Acc:Q9SQT4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.