Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92761 | Sorghum | cytosol, plastid | 91.38 | 96.36 |
| Zm00001d028773_P002 | Maize | cytosol, plastid | 93.1 | 93.1 |
| TraesCS4D01G193300.1 | Wheat | unclear | 87.93 | 92.73 |
| TraesCS4A01G111800.1 | Wheat | cytosol, plastid | 87.93 | 92.73 |
| Os03t0295500-01 | Rice | mitochondrion | 83.62 | 88.18 |
| GSMUA_Achr6P08740_001 | Banana | cytosol | 74.14 | 80.37 |
| GSMUA_Achr3P17940_001 | Banana | mitochondrion | 71.55 | 77.57 |
| AT5G18800.2 | Thale cress | cytosol | 66.38 | 72.64 |
| VIT_05s0020g02150.t01 | Wine grape | cytosol | 66.38 | 72.64 |
| CDY47183 | Canola | cytosol | 66.38 | 72.64 |
| CDY02602 | Canola | cytosol | 66.38 | 72.64 |
| CDX92580 | Canola | cytosol | 66.38 | 72.64 |
| CDX88910 | Canola | cytosol | 66.38 | 72.64 |
| CDX70852 | Canola | cytosol | 66.38 | 72.64 |
| Bra023693.1-P | Field mustard | cytosol | 66.38 | 72.64 |
| Bra002186.1-P | Field mustard | cytosol | 66.38 | 72.64 |
| GSMUA_Achr7P18280_001 | Banana | cytosol | 42.24 | 72.06 |
| KRH76302 | Soybean | cytosol | 65.52 | 71.7 |
| PGSC0003DMT400058536 | Potato | cytosol | 65.52 | 71.7 |
| Solyc08g080240.2.1 | Tomato | cytosol | 64.66 | 71.43 |
| CDY13921 | Canola | cytosol | 64.66 | 70.75 |
| KRH65238 | Soybean | cytosol | 63.79 | 69.81 |
| AT3G06310.1 | Thale cress | cytosol | 64.66 | 69.44 |
| PGSC0003DMT400032530 | Potato | cytosol | 40.52 | 68.12 |
| HORVU4Hr1G055850.1 | Barley | cytosol | 87.93 | 63.75 |
| Bra006481.1-P | Field mustard | mitochondrion | 67.24 | 58.21 |
Protein Annotations
| EnsemblPlants:Zm00001d047720_P003 | EnsemblPlants:Zm00001d047720_T003 | EnsemblPlantsGene:Zm00001d047720 | InterPro:CHCH | PANTHER:PTHR13344 | PANTHER:PTHR13344:SF2 |
| PFAM:PF06747 | PFscan:PS51808 | ProteinID:AQL07388.1 | UniParc:UPI00084463C0 | UniProt:A0A1D6PCQ3 | MapMan:2.4.1.4.1.4 |
Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
Coordinates
chr9:-:139930843..139934802
Molecular Weight (calculated)
13145.7 Da
IEP (calculated)
6.480
GRAVY (calculated)
-0.536
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MSASSTPVDA LGEPIPTSSV LMAASKHIAV RCRPENVAFL NCKKKDPNPE KCLEKGRQVT SCVLSLNIYT PRLKELHQKC PKEMDEYAGC MYYYTNEFDF
101: CRKEQQAFEE SCPISE
101: CRKEQQAFEE SCPISE
001: MSSAVDATGN PIPTSAVLTA SAKHIGMRCM PENVAFLKCK KNDPNPEKCL DKGRDVTRCV LGLLKDLHQK CQKEMDDYVG CMYYYTNEFD LCRKEQEAFE
101: KVCPLK
101: KVCPLK
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Source:UniProtKB/Swiss-Prot;Acc:Q8LGE7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.