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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 1
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • peroxisome 1
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g090710.2.1 Tomato cytosol, unclear 78.7 79.64
VIT_15s0021g02410.t01 Wine grape cytosol 72.19 73.49
PGSC0003DMT400044217 Potato cytosol 71.6 72.89
GSMUA_Achr5P13450_001 Banana cytosol 62.43 68.28
KRH19181 Soybean endoplasmic reticulum 70.41 63.81
VIT_01s0010g03100.t01 Wine grape cytosol 10.06 60.71
AT5G56720.1 Thale cress cytosol, endoplasmic reticulum 60.06 54.57
Bra002797.1-P Field mustard endoplasmic reticulum 60.06 54.42
CDY32764 Canola endoplasmic reticulum 60.06 54.42
CDY32878 Canola endoplasmic reticulum, golgi, plasma membrane 59.47 53.89
PGSC0003DMT400079767 Potato cytosol, plastid 34.91 26.94
Protein Annotations
KEGG:00020+1.1.1.37KEGG:00270+1.1.1.37KEGG:00620+1.1.1.37KEGG:00630+1.1.1.37KEGG:00680+1.1.1.37KEGG:00710+1.1.1.37
KEGG:00720+1.1.1.37MapMan:1.4.2EntrezGene:102585937Gene3D:3.40.50.720Gene3D:3.90.110.10MapMan:5.1.1.3
GO:GO:0003674GO:GO:0003824GO:GO:0005975GO:GO:0006091GO:GO:0006099GO:GO:0006108
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016491GO:GO:0016615GO:GO:0016616
GO:GO:0030060GO:GO:0055114InterPro:IPR015955InterPro:Lactate/malate_DH_CInterPro:Lactate/malate_DH_NInterPro:Lactate_DH/Glyco_Ohase_4_C
UniProt:M1CGF8InterPro:Malate_DH_ASInterPro:Malate_DH_type2InterPro:NAD(P)-bd_dom_sfPFAM:PF00056PFAM:PF02866
EnsemblPlantsGene:PGSC0003DMG400026029PGSC:PGSC0003DMG400026029EnsemblPlants:PGSC0003DMT400066960ScanProsite:PS00068PANTHER:PTHR23382PANTHER:PTHR23382:SF7
SUPFAM:SSF51735SUPFAM:SSF56327TIGRFAMs:TIGR01759UniParc:UPI000296EDDBSEG:seg:
Description
Malate dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400026029]
Coordinates
chr1:+:69916466..69919053
Molecular Weight (calculated)
36997.8 Da
IEP (calculated)
9.865
GRAVY (calculated)
0.226
Length
338 amino acids
Sequence
(BLAST)
001: MAKQPTRVLV TGAAGQIGYA LVPMIARGAM LGLDQPVIIH MLDIEPAAES LKGVKMELID AAFPLLKDVV ATTDVVEACK GVNVAVMVGG FPRKEGMERK
101: DVMTKNVSIY KAQASALEQH AAPDCKVLVV ANPANTNALI LKEFAPSFPA KNITCLTRLD HNRALGQVSE KLNVHVGDVK NVTIWGNHSS TQYPDVNHAT
201: VKTAAGEKPV RELVANDQWL NTEFITTVQQ RGAAIIKARK LSSALSAASS ACDHIRDWVL GTPKVKYHPF LLLTLIKMGH LLTTILSVMP RLPFRILLTS
301: IKCMSFLYWA KFLLHVLFRG HGFQWGSILM DLMAFQLV
Best Arabidopsis Sequence Match ( AT5G43330.1 )
(BLAST)
001: MAKEPVRVLV TGAAGQIGYA LVPMIARGIM LGADQPVILH MLDIPFAAEA LNGVKMELVD AAFPLLKGVV ATTDAVEACT GVNVAVMVGG FPRKEGMERK
101: DVMSKNVSIY KSQASALEKH AAPNCKVLVV ANPANTNALI LKEFAPSIPE KNITCLTRLD HNRALGQVSE RLSVPVSDVK NVIIWGNHSS TQYPDVNHAT
201: VKTSVGEKPV RELVKNDEWL NGEFISTVQQ RGAAIIKARK LSSALSAASS ACDHIRDWVV GTPEGTFVSM GVYSDGSYNV PAGLIYSFPV TCRNGEWTIV
301: QGLPIDDASR KKMDLTAEEL KEEKDLAYSC LS
Arabidopsis Description
MDH2Malate dehydrogenase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P57106]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.