Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- peroxisome 1
- mitochondrion 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc01g090710.2.1 | Tomato | cytosol, unclear | 78.7 | 79.64 |
VIT_15s0021g02410.t01 | Wine grape | cytosol | 72.19 | 73.49 |
PGSC0003DMT400044217 | Potato | cytosol | 71.6 | 72.89 |
GSMUA_Achr5P13450_001 | Banana | cytosol | 62.43 | 68.28 |
KRH19181 | Soybean | endoplasmic reticulum | 70.41 | 63.81 |
VIT_01s0010g03100.t01 | Wine grape | cytosol | 10.06 | 60.71 |
AT5G56720.1 | Thale cress | cytosol, endoplasmic reticulum | 60.06 | 54.57 |
Bra002797.1-P | Field mustard | endoplasmic reticulum | 60.06 | 54.42 |
CDY32764 | Canola | endoplasmic reticulum | 60.06 | 54.42 |
CDY32878 | Canola | endoplasmic reticulum, golgi, plasma membrane | 59.47 | 53.89 |
PGSC0003DMT400079767 | Potato | cytosol, plastid | 34.91 | 26.94 |
Protein Annotations
KEGG:00020+1.1.1.37 | KEGG:00270+1.1.1.37 | KEGG:00620+1.1.1.37 | KEGG:00630+1.1.1.37 | KEGG:00680+1.1.1.37 | KEGG:00710+1.1.1.37 |
KEGG:00720+1.1.1.37 | MapMan:1.4.2 | EntrezGene:102585937 | Gene3D:3.40.50.720 | Gene3D:3.90.110.10 | MapMan:5.1.1.3 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006099 | GO:GO:0006108 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016615 | GO:GO:0016616 |
GO:GO:0030060 | GO:GO:0055114 | InterPro:IPR015955 | InterPro:Lactate/malate_DH_C | InterPro:Lactate/malate_DH_N | InterPro:Lactate_DH/Glyco_Ohase_4_C |
UniProt:M1CGF8 | InterPro:Malate_DH_AS | InterPro:Malate_DH_type2 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00056 | PFAM:PF02866 |
EnsemblPlantsGene:PGSC0003DMG400026029 | PGSC:PGSC0003DMG400026029 | EnsemblPlants:PGSC0003DMT400066960 | ScanProsite:PS00068 | PANTHER:PTHR23382 | PANTHER:PTHR23382:SF7 |
SUPFAM:SSF51735 | SUPFAM:SSF56327 | TIGRFAMs:TIGR01759 | UniParc:UPI000296EDDB | SEG:seg | : |
Description
Malate dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400026029]
Coordinates
chr1:+:69916466..69919053
Molecular Weight (calculated)
36997.8 Da
IEP (calculated)
9.865
GRAVY (calculated)
0.226
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKQPTRVLV TGAAGQIGYA LVPMIARGAM LGLDQPVIIH MLDIEPAAES LKGVKMELID AAFPLLKDVV ATTDVVEACK GVNVAVMVGG FPRKEGMERK
101: DVMTKNVSIY KAQASALEQH AAPDCKVLVV ANPANTNALI LKEFAPSFPA KNITCLTRLD HNRALGQVSE KLNVHVGDVK NVTIWGNHSS TQYPDVNHAT
201: VKTAAGEKPV RELVANDQWL NTEFITTVQQ RGAAIIKARK LSSALSAASS ACDHIRDWVL GTPKVKYHPF LLLTLIKMGH LLTTILSVMP RLPFRILLTS
301: IKCMSFLYWA KFLLHVLFRG HGFQWGSILM DLMAFQLV
101: DVMTKNVSIY KAQASALEQH AAPDCKVLVV ANPANTNALI LKEFAPSFPA KNITCLTRLD HNRALGQVSE KLNVHVGDVK NVTIWGNHSS TQYPDVNHAT
201: VKTAAGEKPV RELVANDQWL NTEFITTVQQ RGAAIIKARK LSSALSAASS ACDHIRDWVL GTPKVKYHPF LLLTLIKMGH LLTTILSVMP RLPFRILLTS
301: IKCMSFLYWA KFLLHVLFRG HGFQWGSILM DLMAFQLV
001: MAKEPVRVLV TGAAGQIGYA LVPMIARGIM LGADQPVILH MLDIPFAAEA LNGVKMELVD AAFPLLKGVV ATTDAVEACT GVNVAVMVGG FPRKEGMERK
101: DVMSKNVSIY KSQASALEKH AAPNCKVLVV ANPANTNALI LKEFAPSIPE KNITCLTRLD HNRALGQVSE RLSVPVSDVK NVIIWGNHSS TQYPDVNHAT
201: VKTSVGEKPV RELVKNDEWL NGEFISTVQQ RGAAIIKARK LSSALSAASS ACDHIRDWVV GTPEGTFVSM GVYSDGSYNV PAGLIYSFPV TCRNGEWTIV
301: QGLPIDDASR KKMDLTAEEL KEEKDLAYSC LS
101: DVMSKNVSIY KSQASALEKH AAPNCKVLVV ANPANTNALI LKEFAPSIPE KNITCLTRLD HNRALGQVSE RLSVPVSDVK NVIIWGNHSS TQYPDVNHAT
201: VKTSVGEKPV RELVKNDEWL NGEFISTVQQ RGAAIIKARK LSSALSAASS ACDHIRDWVV GTPEGTFVSM GVYSDGSYNV PAGLIYSFPV TCRNGEWTIV
301: QGLPIDDASR KKMDLTAEEL KEEKDLAYSC LS
Arabidopsis Description
MDH2Malate dehydrogenase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P57106]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.