Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 3
- endoplasmic reticulum 5
- vacuole 3
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002797.1-P | Field mustard | endoplasmic reticulum | 99.46 | 99.46 |
| CDY32878 | Canola | endoplasmic reticulum, golgi, plasma membrane | 97.86 | 97.86 |
| AT5G56720.1 | Thale cress | cytosol, endoplasmic reticulum | 86.86 | 87.1 |
| Solyc01g090710.2.1 | Tomato | cytosol, unclear | 66.22 | 73.95 |
| VIT_15s0021g02410.t01 | Wine grape | cytosol | 65.68 | 73.8 |
| GSMUA_Achr5P13450_001 | Banana | cytosol | 60.59 | 73.14 |
| CDX98109 | Canola | cytosol, endoplasmic reticulum, peroxisome | 42.36 | 72.15 |
| CDY15504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 63.27 | 71.08 |
| CDY43609 | Canola | peroxisome | 63.27 | 71.08 |
| CDY32953 | Canola | peroxisome | 63.0 | 70.78 |
| CDY18230 | Canola | peroxisome | 62.73 | 70.48 |
| CDX89826 | Canola | peroxisome | 62.73 | 70.48 |
| CDY67454 | Canola | cytosol, endoplasmic reticulum, peroxisome | 62.73 | 70.48 |
| KRH19181 | Soybean | endoplasmic reticulum | 68.1 | 68.1 |
| PGSC0003DMT400066960 | Potato | mitochondrion | 54.42 | 60.06 |
| VIT_01s0010g03100.t01 | Wine grape | cytosol | 6.97 | 46.43 |
| CDX88669 | Canola | plastid | 38.61 | 32.43 |
| CDY58562 | Canola | plastid | 38.61 | 32.43 |
| CDY32993 | Canola | plastid | 38.34 | 32.35 |
| CDY43863 | Canola | plastid | 38.34 | 32.28 |
| CDY02811 | Canola | plastid | 38.07 | 32.13 |
| CDY32711 | Canola | plastid | 38.07 | 32.05 |
Protein Annotations
| KEGG:00020+1.1.1.37 | KEGG:00270+1.1.1.37 | KEGG:00620+1.1.1.37 | KEGG:00630+1.1.1.37 | KEGG:00680+1.1.1.37 | KEGG:00710+1.1.1.37 |
| KEGG:00720+1.1.1.37 | MapMan:1.4.2 | Gene3D:3.40.50.720 | Gene3D:3.90.110.10 | MapMan:5.1.1.3 | GO:A0A078H5M6 |
| UniProt:A0A078H5M6 | EnsemblPlants:CDY32764 | ProteinID:CDY32764 | ProteinID:CDY32764.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006099 | GO:GO:0006108 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016615 |
| GO:GO:0016616 | GO:GO:0019752 | GO:GO:0030060 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00052823001 | InterPro:IPR015955 |
| InterPro:L-lactate/malate_DH | InterPro:Lactate/malate_DH_C | InterPro:Lactate/malate_DH_N | InterPro:Lactate_DH/Glyco_Ohase_4_C | InterPro:Malate_DH_AS | InterPro:Malate_DH_NAD-dep_euk |
| InterPro:Malate_DH_type2 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00056 | PFAM:PF02866 | PIRSF:PIRSF000102 | ScanProsite:PS00068 |
| PANTHER:PTHR23382 | PANTHER:PTHR23382:SF5 | MetaCyc:PWY-1622 | MetaCyc:PWY-5392 | MetaCyc:PWY-561 | MetaCyc:PWY-5690 |
| MetaCyc:PWY-5913 | MetaCyc:PWY-6728 | MetaCyc:PWY-6969 | MetaCyc:PWY-7115 | MetaCyc:PWY-7383 | SUPFAM:SSF51735 |
| SUPFAM:SSF56327 | TIGRFAMs:TIGR01758 | TIGRFAMs:TIGR01759 | TMHMM:TMhelix | UniParc:UPI0004EF0614 | SEG:seg |
Description
BnaA10g10850DMalate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078H5M6]
Coordinates
chrLK032299:-:114641..115904
Molecular Weight (calculated)
40854.5 Da
IEP (calculated)
6.177
GRAVY (calculated)
0.028
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVVGGEVDY TFVIQKSLVL LLCVVLSWKM IVYMCNLLKI EKEPIRVLVT GAAGNIGYAI SPMIARGMML GQDQPMILHL LDIEPASKSL EAVKMELQDS
101: AFPLLHGVFA TTNIDEACKG VNIAIMIGGF ARKEGMERRD VMSKNAVIFK AQASALERYA SDDCKVLVVA NPANTNALIL KEFAPSIPEE NITCLTRLDH
201: NRAQARLAEK LSVPVSSVKN VIVWGNHSST QYPDSNHATV STKTGDQPVR ELLVADQKWL KNEFSTEVQQ RGAEILRARR QSSALSAASA ACDHIHDWFL
301: GTPKGSWVSM GVCSDGSYGI APGLVYSFPV ICEKGSWKIV QGLSIDEFSR EKMDDSAREL AEEKALAYSC LNV
101: AFPLLHGVFA TTNIDEACKG VNIAIMIGGF ARKEGMERRD VMSKNAVIFK AQASALERYA SDDCKVLVVA NPANTNALIL KEFAPSIPEE NITCLTRLDH
201: NRAQARLAEK LSVPVSSVKN VIVWGNHSST QYPDSNHATV STKTGDQPVR ELLVADQKWL KNEFSTEVQQ RGAEILRARR QSSALSAASA ACDHIHDWFL
301: GTPKGSWVSM GVCSDGSYGI APGLVYSFPV ICEKGSWKIV QGLSIDEFSR EKMDDSAREL AEEKALAYSC LNV
001: MEFVGEEINY TFVIQKVLVL LFCVGLSWKM IIYMCNLLNI EKDPIRVLIT GAAGNIGYAI APMIARGIML GPDQPMILHL LDIEPASSSL EAVKMELQDS
101: AFPLLKGVIA TTNVVEACKD VNIVIMIGGF PRIAGMERKD VMSKNVVIYK AQASALERYA SDDCKVLVVA NPANTNALIL KEFAPSIPEE NITCLTRLDH
201: NRALAQLADK LSVPVSSVKN VIVWGNHSST QYPDTNHATV STKTGDRPLK ELVTDHNWLK NEFIVEVQQR GAAVLRARKQ SSAFSAAGAA CDHIRDWFLG
301: TPKGTWVSMG VCSDGSYGIP PGLVYSFPVI CEKGSWKIVQ GLSIDEFSRE KMDDSARELA EEKDLAYSCL NV
101: AFPLLKGVIA TTNVVEACKD VNIVIMIGGF PRIAGMERKD VMSKNVVIYK AQASALERYA SDDCKVLVVA NPANTNALIL KEFAPSIPEE NITCLTRLDH
201: NRALAQLADK LSVPVSSVKN VIVWGNHSST QYPDTNHATV STKTGDRPLK ELVTDHNWLK NEFIVEVQQR GAAVLRARKQ SSAFSAAGAA CDHIRDWFLG
301: TPKGTWVSMG VCSDGSYGIP PGLVYSFPVI CEKGSWKIVQ GLSIDEFSRE KMDDSARELA EEKDLAYSCL NV
Arabidopsis Description
Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UAN5]
SUBAcon: [endoplasmic reticulum,cytosol]
SUBAcon: [endoplasmic reticulum,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.