Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g071180.2.1 | Tomato | cytosol | 91.58 | 92.94 |
| PGSC0003DMT400062841 | Potato | plastid | 63.37 | 63.37 |
| VIT_17s0000g05380.t01 | Wine grape | cytosol | 40.29 | 59.46 |
| PGSC0003DMT400081918 | Potato | cytosol | 23.44 | 49.23 |
| KRH03396 | Soybean | cytosol | 41.76 | 44.02 |
| KRH56986 | Soybean | cytosol | 41.03 | 42.42 |
| Zm00001d009402_P001 | Maize | cytosol, mitochondrion | 25.64 | 38.89 |
| PGSC0003DMT400006527 | Potato | cytosol | 13.19 | 38.3 |
| PGSC0003DMT400032411 | Potato | cytosol, mitochondrion, nucleus, plastid | 20.15 | 37.41 |
| PGSC0003DMT400019607 | Potato | cytosol | 12.82 | 37.23 |
| OQU86998 | Sorghum | cytosol, mitochondrion | 25.64 | 37.04 |
| PGSC0003DMT400029467 | Potato | extracellular | 15.02 | 34.45 |
| Os01t0555600-00 | Rice | cytosol | 26.74 | 34.27 |
| PGSC0003DMT400049549 | Potato | cytosol | 15.02 | 33.88 |
| PGSC0003DMT400053284 | Potato | cytosol | 27.47 | 32.47 |
Protein Annotations
| Gene3D:3.30.740.10 | MapMan:35.2 | InterPro:DLC_sf | InterPro:Dynein_light_chain_typ-1/2 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0030286 |
| InterPro:IPR037177 | UniProt:M1D6J0 | PFAM:PF01221 | EnsemblPlantsGene:PGSC0003DMG400033063 | PGSC:PGSC0003DMG400033063 | EnsemblPlants:PGSC0003DMT400083122 |
| PANTHER:PTHR11886 | PANTHER:PTHR11886:SF37 | SMART:SM01375 | SUPFAM:SSF54648 | UniParc:UPI0002962520 | : |
Description
Axonemal dynein light chain [Source:PGSC_GENE;Acc:PGSC0003DMG400033063]
Coordinates
chr6:+:52026266..52027663
Molecular Weight (calculated)
30588.8 Da
IEP (calculated)
10.472
GRAVY (calculated)
-0.498
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MANNTTHRRI LAAPDHNPKT SISMDPTLKK QPKPTPFTSK STIDNISNQF SHLNANHKIL KSGHTSYSLD THLKPKSWTG SSVLDSSCSG LTKSKSQQGK
101: TEAIIKKVPQ KGKEFHKEVD VKRAFVNLSK SQEIERFKGF DEIKKQSLSV LLKNSGRRKS FCGSKIELTD FFSCSGVKVM SVDMPPFMQI HAVNCARKTR
201: DSLEKFTSKA LALTLKKEFD QVYGPAWHCI VGTSFGSFVT HSIGGFMYFS MDHKIYVLLF KTTVQKEESS LKS
101: TEAIIKKVPQ KGKEFHKEVD VKRAFVNLSK SQEIERFKGF DEIKKQSLSV LLKNSGRRKS FCGSKIELTD FFSCSGVKVM SVDMPPFMQI HAVNCARKTR
201: DSLEKFTSKA LALTLKKEFD QVYGPAWHCI VGTSFGSFVT HSIGGFMYFS MDHKIYVLLF KTTVQKEESS LKS
001: MNEERPKKSK KKSLMNFYKF SITSSKHSLI NPKSKPKIPI STPSISQQEV EEKPIVQSNK SHQNHVMRDI FELETTCSRN NERKKGGGAA EEGRKSVSHV
101: ERDTAARIEA AAEMLTVRIL AADMPGFMQA HAFRCARMTL DSLEKFSSKH MAFNLKKEFD KGYGPAWHCI VGSSFGSFVT HSTGCFIYFS MDKLYVLLFK
201: TKVRPASPH
101: ERDTAARIEA AAEMLTVRIL AADMPGFMQA HAFRCARMTL DSLEKFSSKH MAFNLKKEFD KGYGPAWHCI VGSSFGSFVT HSTGCFIYFS MDKLYVLLFK
201: TKVRPASPH
Arabidopsis Description
At5g20110 [Source:UniProtKB/TrEMBL;Acc:Q6NM36]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.