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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 5
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400002020 Potato extracellular 94.36 95.44
Solyc02g090540.2.1 Tomato plastid 77.82 84.15
KRH57891 Soybean mitochondrion 76.69 76.4
KRH04638 Soybean mitochondrion 74.06 71.64
KRH28499 Soybean plastid 70.3 70.57
CDY65018 Canola plastid 55.26 69.67
AT3G50560.1 Thale cress plastid 66.54 65.07
CDY65649 Canola plastid 66.92 64.96
Bra030018.1-P Field mustard plastid 66.54 64.6
CDY67513 Canola plastid 66.54 64.6
GSMUA_Achr3P20350_001 Banana plastid 59.02 64.34
Bra036090.1-P Field mustard plastid 65.04 63.14
CDY52823 Canola plastid 64.66 62.77
GSMUA_Achr10P... Banana cytosol, plastid 55.64 61.67
Os08t0476300-02 Rice mitochondrion 59.4 61.48
EES14019 Sorghum mitochondrion 58.27 59.62
Zm00001d031808_P001 Maize mitochondrion, plastid 57.14 59.14
VIT_00s0379g00050.t01 Wine grape cytosol 28.57 20.16
Protein Annotations
EnsemblPlants:Solyc02g065060.2.1EnsemblPlantsGene:Solyc02g065060.2Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famPANTHER:PTHR43431
PFAM:PF00106PRINTS:PR00081SEG:segSUPFAM:SSF51735UniParc:UPI0002768A14UniProt:K4B6U1
MapMan:35.2:::::
Description
No Description!
Coordinates
chr2:+:36230064..36232860
Molecular Weight (calculated)
28979.8 Da
IEP (calculated)
7.093
GRAVY (calculated)
0.001
Length
266 amino acids
Sequence
(BLAST)
001: MRSMASSVSS KGIAAIVGVG PKLGRSIARK FAHEGYTVAI LARDLGRLSK FADEIAREEK AQVFAIRIDC SDSRSIREAF EGVLSLGFVE VLVYNAHQPT
101: FWHPTDFTDI KIEHFEKSLA VSSVGAFHCA QQVLLGMVER GRGTILFTGC SASLSGIPGY SELCCGKFAM RGLSQCLAKE FQPLGVHVAH VIIHGIVGAP
201: ARGAIGSSSQ QRLLVGEPEQ QQTGVWAGEE LMDPDGVAQT YWHLHIQDRS AWTQEIDLHP STQRYI
Best Arabidopsis Sequence Match ( AT3G50560.1 )
(BLAST)
001: MMRNVGSSSS GSKGIAAVVG VGPKLGRSIA RKFAHEGYTV AILARDLGRL SRVAEEIARE EKAQVFAIRI DCADPRSVRE AFEGVLSLGF VEVLVYNAYH
101: SSYASHHPTS FTHIPFQSFQ TSISVSVFAA FLCAQQVTPG MMEKGKGTIL FTGCSASLNG IAGFSELCCG KFALRALSQC LAKEYQAFGI HVAHVIIDGV
201: VGPPRETNIP PRGMVAEQSF NVGGEDGEGE GESSGVMGMD PDVLAQTYWY LHVQDRRAWT HELDIRPSNP NF
Arabidopsis Description
AT3g50560/T20E23_160 [Source:UniProtKB/TrEMBL;Acc:Q943Z4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.