CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036090.1-P	Field mustard	plastid	99.64	99.64
CDY65018	Canola	plastid	75.18	97.63
CDY67513	Canola	plastid	93.43	93.43
CDY65649	Canola	plastid	93.07	93.07
AT3G50560.1	Thale cress	plastid	90.88	91.54
Solyc02g090540.2.1	Tomato	plastid	62.77	69.92
PGSC0003DMT400025952	Potato	mitochondrion	65.33	68.32
KRH57891	Soybean	mitochondrion	64.96	66.67
KRH28499	Soybean	plastid	64.23	66.42
PGSC0003DMT400002020	Potato	extracellular	63.14	65.78
Solyc02g065060.2.1	Tomato	mitochondrion	62.77	64.66
KRH04638	Soybean	mitochondrion	63.87	63.64
GSMUA_Achr3P20350_001	Banana	plastid	54.74	61.48
Os08t0476300-02	Rice	mitochondrion	55.47	59.14
EES14019	Sorghum	mitochondrion	55.11	58.08
Zm00001d031808_P001	Maize	mitochondrion, plastid	53.65	57.2
GSMUA_Achr10P...	Banana	cytosol, plastid	48.18	55.0
VIT_00s0379g00050.t01	Wine grape	cytosol	24.45	17.77

Protein Annotations

EnsemblPlants:CDY52823	EnsemblPlantsGene:GSBRNA2T00007967001	Gene3D:3.40.50.720	GO:A0A078IUY8	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43431	PFAM:PF00106	PRINTS:PR00081	ProteinID:CDY52823	ProteinID:CDY52823.1	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0004EED058	UniProt:A0A078IUY8	MapMan:35.2	:	:

Description

BnaAnng11700DBnaAnng11700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUY8]

Coordinates

chrLK033135:+:663..3852

Molecular Weight (calculated)

29481.0 Da

IEP (calculated)

6.934

GRAVY (calculated)

-0.046

Length

274 amino acids

Sequence
(BLAST)

001: MMRNVGSSSS SGKGIAAVVG VGPQLGRSVA RKFAHEGYTV AILARDLGRL SRVAEEIARE EKAQVFAIRI DCADPRSVRE AFEGVLSLGF VEVLVYNAYH
101: SSSSYPSHHP TSFTHIPFQS FQTSISVSVF AAFLCSQQVI PGMMDKGKGT ILFSGCSASL NGVAGFSELC CGKFALRALS QCLAREYQAF GIHVAHVIID
201: GVVGPPRERN IAPRGTVAEQ SFNTGGQDGE GEGESSGVMG MDPDVLAQTY WSLHVQDQRA WTQELDIRPS NTRF

Best Arabidopsis Sequence Match ( AT3G50560.1 )
(BLAST)

001: MMRNVGSSSS GSKGIAAVVG VGPKLGRSIA RKFAHEGYTV AILARDLGRL SRVAEEIARE EKAQVFAIRI DCADPRSVRE AFEGVLSLGF VEVLVYNAYH
101: SSYASHHPTS FTHIPFQSFQ TSISVSVFAA FLCAQQVTPG MMEKGKGTIL FTGCSASLNG IAGFSELCCG KFALRALSQC LAKEYQAFGI HVAHVIIDGV
201: VGPPRETNIP PRGMVAEQSF NVGGEDGEGE GESSGVMGMD PDVLAQTYWY LHVQDRRAWT HELDIRPSNP NF

Arabidopsis Description

AT3g50560/T20E23_160 [Source:UniProtKB/TrEMBL;Acc:Q943Z4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.