CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57891	Soybean	mitochondrion	85.09	87.64
Solyc02g090540.2.1	Tomato	plastid	71.27	79.67
KRH28499	Soybean	plastid	72.73	75.47
Solyc02g065060.2.1	Tomato	mitochondrion	71.64	74.06
PGSC0003DMT400002020	Potato	extracellular	70.55	73.76
PGSC0003DMT400025952	Potato	mitochondrion	69.82	73.28
CDY65018	Canola	plastid	54.91	71.56
GSMUA_Achr3P20350_001	Banana	plastid	58.91	66.39
AT3G50560.1	Thale cress	plastid	65.45	66.18
Bra030018.1-P	Field mustard	plastid	65.09	65.33
CDY67513	Canola	plastid	65.09	65.33
CDY65649	Canola	plastid	65.09	65.33
Bra036090.1-P	Field mustard	plastid	64.0	64.23
CDY52823	Canola	plastid	63.64	63.87
EES14019	Sorghum	mitochondrion	60.0	63.46
Os08t0476300-02	Rice	mitochondrion	58.55	62.65
Zm00001d031808_P001	Maize	mitochondrion, plastid	58.55	62.65
GSMUA_Achr10P...	Banana	cytosol, plastid	53.45	61.25
VIT_00s0379g00050.t01	Wine grape	cytosol	27.27	19.89

Protein Annotations

EMBL:ACUP02010467	EnsemblPlants:KRH04638	EnsemblPlantsGene:GLYMA_17G176200	EntrezGene:100803753	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR43431	PFAM:PF00106	PRINTS:PR00081	ProteinID:KRH04638	ProteinID:KRH04638.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI0006EE10FE	UniProt:A0A0R0FEP1	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr17:-:18555521..18558923

Molecular Weight (calculated)

29742.6 Da

IEP (calculated)

7.437

GRAVY (calculated)

-0.043

Length

275 amino acids

Sequence
(BLAST)

001: MLLVREGERK REMRSMASSA SSRGIAAIVG VGPNLGLSIA RKFAHEGYTV AILARDLGRL SRFADEIARE EKAQVFAIRI DCSDSRSVRE AFEGVLSLGF
101: VEILVYNAYQ PLPWCPSSFQ DLRIESFERS LAVSSVGAFH CAQQVLPGMV ERGKGTILFT GCSASLNGIA GYSELCCGKF ALRALSQCLA KEFQPQGVHL
201: AHVIIDGVIG PPRGPTLTSS SSQRGNSLGE QSSGGGGEGT MDPDALAQTF WHLHVQDRNA WTLEMDLRSP SARFF

Best Arabidopsis Sequence Match ( AT3G50560.1 )
(BLAST)

001: MMRNVGSSSS GSKGIAAVVG VGPKLGRSIA RKFAHEGYTV AILARDLGRL SRVAEEIARE EKAQVFAIRI DCADPRSVRE AFEGVLSLGF VEVLVYNAYH
101: SSYASHHPTS FTHIPFQSFQ TSISVSVFAA FLCAQQVTPG MMEKGKGTIL FTGCSASLNG IAGFSELCCG KFALRALSQC LAKEYQAFGI HVAHVIIDGV
201: VGPPRETNIP PRGMVAEQSF NVGGEDGEGE GESSGVMGMD PDVLAQTYWY LHVQDRRAWT HELDIRPSNP NF

Arabidopsis Description

AT3g50560/T20E23_160 [Source:UniProtKB/TrEMBL;Acc:Q943Z4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.