Factsheet for Os08t0476300-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14019	Sorghum	mitochondrion	88.33	87.31
Zm00001d031808_P001	Maize	mitochondrion, plastid	86.38	86.38
GSMUA_Achr3P20350_001	Banana	plastid	61.09	64.34
CDY65018	Canola	plastid	51.75	63.03
Solyc02g090540.2.1	Tomato	plastid	59.53	62.2
KRH28499	Soybean	plastid	62.26	60.38
GSMUA_Achr10P...	Banana	cytosol, plastid	55.64	59.58
KRH57891	Soybean	mitochondrion	61.87	59.55
PGSC0003DMT400025952	Potato	mitochondrion	60.7	59.54
Solyc02g065060.2.1	Tomato	mitochondrion	61.48	59.4
PGSC0003DMT400002020	Potato	extracellular	60.31	58.94
KRH04638	Soybean	mitochondrion	62.65	58.55
CDY65649	Canola	plastid	61.09	57.3
CDY67513	Canola	plastid	61.09	57.3
Bra030018.1-P	Field mustard	plastid	61.09	57.3
AT3G50560.1	Thale cress	plastid	60.31	56.99
Bra036090.1-P	Field mustard	plastid	59.53	55.84
CDY52823	Canola	plastid	59.14	55.47
VIT_00s0379g00050.t01	Wine grape	cytosol	23.35	15.92

Protein Annotations

EMBL:AK105359	EnsemblPlants:Os08t0476300-02	EnsemblPlantsGene:Os08g0476300	EntrezGene:4345829	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	ncoils:Coil	PANTHER:PTHR43431	PFAM:PF00106	PRINTS:PR00081	ProteinID:BAD09200.1
ProteinID:BAF23954.1	ProteinID:BAT05885.1	ProteinID:EEE68863.1	RefSeq:XP_015648841.1	SUPFAM:SSF51735	UniParc:UPI000023AD5B
UniProt:Q6ZG50	MapMan:35.2	:	:	:	:

Description

Glucose/ribitol dehydrogenase family protein. (Os08t0476300-01);Glucose/ribitol dehydrogenase family protein. (Os08t0476300-02)

Coordinates

chr8:+:23464000..23468392

Molecular Weight (calculated)

26826.7 Da

IEP (calculated)

6.240

GRAVY (calculated)

0.004

Length

257 amino acids

Sequence
(BLAST)

001: MLRSVSGSNS SRGIAAVVGV GPRLGSAVAR KFASEGYTVA ILSRDLEKLS QLAEEIAQEA KAQVFALRVD CADARSVREA FEGVLSLGPV EVLVYNACEP
101: PADGDGDASP RPTPFLAISP DAFHRALAVS AAGAFYCAHQ VIPGMVERGR GTVIFTGSSA SVTGYAGYSD LSCGKFALRG LSQSLAKEFQ PAGVHIAHMI
201: IDGVIGEPRS GRGRCGGETA SSAGADPDAV AQSYWHVHAQ DRSAWTQEMD IRSPSLM

Best Arabidopsis Sequence Match ( AT3G50560.1 )
(BLAST)

001: MMRNVGSSSS GSKGIAAVVG VGPKLGRSIA RKFAHEGYTV AILARDLGRL SRVAEEIARE EKAQVFAIRI DCADPRSVRE AFEGVLSLGF VEVLVYNAYH
101: SSYASHHPTS FTHIPFQSFQ TSISVSVFAA FLCAQQVTPG MMEKGKGTIL FTGCSASLNG IAGFSELCCG KFALRALSQC LAKEYQAFGI HVAHVIIDGV
201: VGPPRETNIP PRGMVAEQSF NVGGEDGEGE GESSGVMGMD PDVLAQTYWY LHVQDRRAWT HELDIRPSNP NF

Arabidopsis Description

AT3g50560/T20E23_160 [Source:UniProtKB/TrEMBL;Acc:Q943Z4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.