CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57891	Soybean	mitochondrion	75.09	74.53
Solyc02g090540.2.1	Tomato	plastid	67.92	73.17
KRH04638	Soybean	mitochondrion	75.47	72.73
CDY65018	Canola	plastid	57.74	72.51
PGSC0003DMT400002020	Potato	extracellular	69.81	70.34
Solyc02g065060.2.1	Tomato	mitochondrion	70.57	70.3
PGSC0003DMT400025952	Potato	mitochondrion	68.68	69.47
AT3G50560.1	Thale cress	plastid	68.68	66.91
Bra030018.1-P	Field mustard	plastid	67.92	65.69
CDY65649	Canola	plastid	67.92	65.69
CDY67513	Canola	plastid	67.92	65.69
Bra036090.1-P	Field mustard	plastid	66.79	64.6
CDY52823	Canola	plastid	66.42	64.23
GSMUA_Achr3P20350_001	Banana	plastid	58.49	63.52
Os08t0476300-02	Rice	mitochondrion	60.38	62.26
EES14019	Sorghum	mitochondrion	60.75	61.92
Zm00001d031808_P001	Maize	mitochondrion, plastid	59.25	61.09
GSMUA_Achr10P...	Banana	cytosol, plastid	53.21	58.75
VIT_00s0379g00050.t01	Wine grape	cytosol	25.28	17.77

Protein Annotations

EMBL:ACUP02006756	EnsemblPlants:KRH28499	EnsemblPlantsGene:GLYMA_11G057800	EntrezGene:100815193	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR43431	PFAM:PF00106	PRINTS:PR00081	ProteinID:KRH28499	ProteinID:KRH28499.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000233CFE7	UniProt:I1LHG2	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr11:+:4361981..4364146

Molecular Weight (calculated)

28646.1 Da

IEP (calculated)

7.868

GRAVY (calculated)

-0.057

Length

265 amino acids

Sequence
(BLAST)

001: MIRSMASSVS SRGNIAAIVG VGPKLGRSIA RKFAHEGYTI AILARDLGRL SGVAEEIARE EKAQVFAIRI DCSDSKSVRD AFEGVLSLGF VEVLVYNANH
101: QPQSLSPNPT SFQNIPLDTF QKSLAVSAVA AFHCAQQVLT GMVEKGKGTI LFTGCSASLY GIAGYSQLCC GKFALRALAQ CLAKEFQPQG VHIAHVIIDG
201: VVAPPRRRRS SSSSSVRDES ISSGEDHEGT MDPDAVAQTY WHLHVQDRTT WTQEIDLRSN NATFF

Best Arabidopsis Sequence Match ( AT3G50560.1 )
(BLAST)

001: MMRNVGSSSS GSKGIAAVVG VGPKLGRSIA RKFAHEGYTV AILARDLGRL SRVAEEIARE EKAQVFAIRI DCADPRSVRE AFEGVLSLGF VEVLVYNAYH
101: SSYASHHPTS FTHIPFQSFQ TSISVSVFAA FLCAQQVTPG MMEKGKGTIL FTGCSASLNG IAGFSELCCG KFALRALSQC LAKEYQAFGI HVAHVIIDGV
201: VGPPRETNIP PRGMVAEQSF NVGGEDGEGE GESSGVMGMD PDVLAQTYWY LHVQDRRAWT HELDIRPSNP NF

Arabidopsis Description

AT3g50560/T20E23_160 [Source:UniProtKB/TrEMBL;Acc:Q943Z4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.