Factsheet for Solyc02g091030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0006g02320.t01	Wine grape	cytosol	6.5	34.11
GSMUA_Achr10P...	Banana	cytosol, extracellular, nucleus	5.76	30.95
Solyc08g007960.1.1	Tomato	mitochondrion	5.17	28.23
Solyc06g072040.1.1	Tomato	nucleus	9.45	27.59
Solyc11g016920.1.1	Tomato	cytosol	5.61	27.54
Solyc03g110860.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	9.31	27.39
AT5G38140.1	Thale cress	nucleus	7.83	27.18
Solyc03g110840.1.1	Tomato	nucleus	6.5	27.16
Solyc02g021330.1.1	Tomato	cytosol	5.61	24.84
Solyc01g079870.2.1	Tomato	nucleus	9.45	24.81
Solyc03g110850.1.1	Tomato	cytosol	5.91	24.54
Solyc03g111450.1.1	Tomato	nucleus	10.49	22.33
Solyc03g111460.1.1	Tomato	cytosol	9.31	21.88
Solyc03g111470.1.1	Tomato	nucleus	8.42	20.88
Solyc11g016910.1.1	Tomato	nucleus	2.66	19.35

Protein Annotations

Gene3D:1.10.20.10	MapMan:15.5.51.3	InterPro:CBFA_NFYB_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982	InterPro:Histone-fold
InterPro:IPR009072	UniProt:K4BCQ2	PFAM:PF00808	PANTHER:PTHR10252	PANTHER:PTHR10252:SF39	SUPFAM:SSF47113
EnsemblPlantsGene:Solyc02g091030.2	EnsemblPlants:Solyc02g091030.2.1	UniParc:UPI00027677BD	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:52466336..52474641

Molecular Weight (calculated)

76872.8 Da

IEP (calculated)

4.054

GRAVY (calculated)

-0.835

Length

677 amino acids

Sequence
(BLAST)

001: MHSSMPSNNK IQQDEDERDP KFMQLLKENL SCFWNQQKEE ILRADPKRKP EMPISRIRRA MKSNDQVKMV SATSTVLLSK AIEMLIMDLT LRAWMQADKG
101: KCRTLKRYDF ARAIRDEELF DFLSDIVPLQ TYKVQKDAND GQGNEPHPAY QVLEPSNIPV EEDANGSQGN EFHPAGQMVQ HQKILVEEAN DVQGNKFDLA
201: NRMVQPHNVP CNFQVQVQAN DGEGYEVHPA YQMVEPNKTS VLKVANDGQG NESNPAYQLV QPNDIAVEED LNGSQGNEFH PVCQMVQPNN IPASFISHRG
301: IPVPLVDLFP EFEFNSHDLL MEEANDVQGN KFHLANQMVQ LQNIPVQGEE NDGQGNEFEP ASNVQPDNIP LLYQFHVRGE ENDAQGNEFN QAFNVQPNNI
401: PLYQFQVRGG ENDYQGNEFE PPSNVQPIYI PQLYQFQVRG EENDGQGNEF DPASNVLPNN NPQLYQFQVR GEENDGQDNE FEPASNVQPN NIPLYQFQVR
501: GEENDGQGNE FNQTSNVFNI PLLYQFQVRG EENDGQGNEF NQAFNVQPDN IPQLYQFQVR GGENDYQGNE FEPPSNVQPI NIPLYQFQVR GGEKDYQGNE
601: FEPPSNVQPI NIPFQVQAEA NDGQGNEFHP TYQMGQPNNI PASFIIPEPL MLPPLINSSP EPEFDIGEFL MDIEEGL

Best Arabidopsis Sequence Match ( AT5G63470.1 )
(BLAST)

001: MDNNNNNNNQ QPPPTSVYPP GSAVTTVIPP PPSGSASIVT GGGATYHHLL QQQQQQLQMF WTYQRQEIEQ VNDFKNHQLP LARIKKIMKA DEDVRMISAE
101: APILFAKACE LFILELTIRS WLHAEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREEIK EEEDAASALG GGGMVAPAAS GVPYYYPPMG QPAVPGGMMI
201: GRPAMDPSGV YAQPPSQAWQ SVWQNSAGGG DDVSYGSGGS SGHGNLDSQG

Arabidopsis Description

NFYC4NF-YC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.