Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046618 | Potato | nucleus | 67.39 | 74.7 |
| Solyc05g005090.2.1 | Tomato | nucleus | 36.96 | 21.25 |
| KRH63561 | Soybean | nucleus | 30.98 | 20.5 |
| VIT_17s0000g08710.t01 | Wine grape | nucleus | 35.33 | 20.38 |
| Solyc01g100510.2.1 | Tomato | nucleus | 29.89 | 16.42 |
| Solyc02g081120.2.1 | Tomato | nucleus | 30.43 | 15.82 |
| Solyc04g077210.2.1 | Tomato | nucleus | 29.35 | 15.21 |
| Solyc12g010410.1.1 | Tomato | nucleus | 19.57 | 10.94 |
| Solyc08g041820.2.1 | Tomato | nucleus | 19.02 | 10.03 |
| Solyc07g007120.2.1 | Tomato | nucleus | 22.83 | 9.74 |
| Solyc08g080120.2.1 | Tomato | nucleus | 15.22 | 9.03 |
| PGSC0003DMT400087440 | Potato | nucleus | 3.26 | 4.76 |
Protein Annotations
| EnsemblPlants:Solyc03g112740.1.1 | EnsemblPlantsGene:Solyc03g112740.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:KNOX1 | InterPro:KNOX2 |
| PANTHER:PTHR11850 | PANTHER:PTHR11850:SF99 | PFAM:PF03790 | PFAM:PF03791 | SEG:seg | SMART:SM01255 |
| SMART:SM01256 | UniParc:UPI0002767698 | UniProt:K4BKC7 | MapMan:15.5.3.4 | : | : |
Description
No Description!
Coordinates
chr3:-:63078870..63081019
Molecular Weight (calculated)
20696.1 Da
IEP (calculated)
4.129
GRAVY (calculated)
-0.385
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIMYEFGG YSDNHDLEAP EYFECPPEAF SDEELFGSAG NTRSLEVISA TNSSIVEEEN IQAKISSHPL YTKLLLTYLD CRKVGAAPEI VDMLDNIVQE
101: NDLHRRSISS TALNQPISDD SELDDFMVTY CDVLAKLKLD LGRSFNEATT FLNDIQTQLT NLSTTTNISD WVRKKTQLLS HKAS
101: NDLHRRSISS TALNQPISDD SELDDFMVTY CDVLAKLKLD LGRSFNEATT FLNDIQTQLT NLSTTTNISD WVRKKTQLLS HKAS
001: MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS SELLPRIRKA EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS
201: QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM
301: DDSNETFFTE
101: ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS
201: QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM
301: DDSNETFFTE
Arabidopsis Description
KNAT2KNOTTED-like from Arabidopsis thaliana 2 [Source:TAIR;Acc:AT1G70510]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.