Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018058 | Potato | endoplasmic reticulum | 97.06 | 98.51 |
| VIT_15s0048g00890.t01 | Wine grape | endoplasmic reticulum, extracellular | 62.5 | 63.43 |
| GSMUA_Achr3P11390_001 | Banana | plasma membrane | 46.32 | 62.38 |
| GSMUA_Achr9P00470_001 | Banana | plasma membrane | 61.03 | 61.94 |
| Solyc06g060550.2.1 | Tomato | extracellular, plasma membrane, vacuole | 61.03 | 59.71 |
| Os06t0136500-01 | Rice | golgi, plasma membrane, vacuole | 35.29 | 57.83 |
| Solyc08g007510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 58.09 | 56.83 |
| EER87801 | Sorghum | endoplasmic reticulum | 55.15 | 55.56 |
| TraesCS7A01G075500.1 | Wheat | endoplasmic reticulum | 52.21 | 52.99 |
| TraesCS4A01G373700.1 | Wheat | endoplasmic reticulum | 51.47 | 52.24 |
| TraesCS7D01G071100.1 | Wheat | endoplasmic reticulum | 51.47 | 52.24 |
| KRH00566 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 50.74 | 50.74 |
| KRH40600 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 50.74 | 50.74 |
| GSMUA_Achr10P... | Banana | plasma membrane | 53.68 | 46.2 |
| Solyc03g063970.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 38.97 | 28.34 |
Protein Annotations
| EnsemblPlants:Solyc05g051030.2.1 | EnsemblPlantsGene:Solyc05g051030.2 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016192 | InterPro:Cornichon | PANTHER:PTHR12290 | PANTHER:PTHR12290:SF18 | PFAM:PF03311 |
| SEG:seg | SMART:SM01398 | TMHMM:TMhelix | UniParc:UPI0002767426 | UniProt:K4C1D5 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5:+:61219469..61225202
Molecular Weight (calculated)
16033.9 Da
IEP (calculated)
4.715
GRAVY (calculated)
0.742
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLLSWLFS FFLLVAVLGT ILYQLMCLAD LEYDYVNPYD SASRINRVVV PEFALQGALC FLHLVTGHWL MFLICLPYLY YNIKVYTDRC HLVDVTEIFN
101: QLPWDKKVRL YKLGYLVILL AFSIFWMVWS IVDDEV
101: QLPWDKKVRL YKLGYLVILL AFSIFWMVWS IVDDEV
001: MGDIWTWLIS FFFLIALVGI IVYQLVCLAD LEFDYINPYD SASRINSVVL PEFIVQGVLC VFYLLTGHWF MTLLCLPYLY YNFHLYSKRQ HLVDVTEIFN
101: LLNWEKKKRL FKLAYIVLNL FLTIFWMIYS ALDDYED
101: LLNWEKKKRL FKLAYIVLNL FLTIFWMIYS ALDDYED
Arabidopsis Description
Protein cornichon homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84W04]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.