Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 2
- plastid 1
- mitochondrion 1
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018200 | Potato | cytosol, nucleus, peroxisome | 93.83 | 92.01 |
| VIT_19s0014g00840.t01 | Wine grape | plasma membrane | 37.22 | 32.88 |
| GSMUA_Achr9P24190_001 | Banana | cytosol, peroxisome, plasma membrane | 33.48 | 29.86 |
| EER99253 | Sorghum | plastid | 30.62 | 29.7 |
| Os09t0534000-01 | Rice | cytosol, nucleus, plasma membrane, plastid | 29.52 | 29.32 |
| Zm00001d021305_P001 | Maize | plastid | 29.74 | 29.22 |
| TraesCS5A01G322900.1 | Wheat | cytosol, nucleus, vacuole | 29.3 | 28.66 |
| HORVU5Hr1G082480.1 | Barley | mitochondrion | 28.85 | 28.36 |
| Solyc02g071900.2.1 | Tomato | cytosol | 34.36 | 27.81 |
| TraesCS5B01G323400.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 29.52 | 25.57 |
| Solyc04g056380.2.1 | Tomato | golgi, nucleus, plasma membrane | 19.38 | 21.36 |
Protein Annotations
| EnsemblPlants:Solyc07g062230.2.1 | EnsemblPlantsGene:Solyc07g062230.2 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019915 | InterPro:Seipin | PANTHER:PTHR21212 | PANTHER:PTHR21212:SF3 | PFAM:PF06775 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000276B663 | UniProt:K4CGQ6 | MapMan:5.9.1 | : | : |
Description
No Description!
Coordinates
chr7:+:65020194..65022627
Molecular Weight (calculated)
51785.8 Da
IEP (calculated)
10.354
GRAVY (calculated)
0.070
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEQATFGEN VVEFNCKKSP NYVTNLVKYS LLLGAEKVLM DRKSQEAFSS SSLSSWTDEA TAREKRRRKG KSVLIDDKLA CGTSRNFGIE SSKEHFNSFD
101: FTSFLAITML KLFGFQMNIL VKLFTFPIFL MNFWIMVLTL PLNTLTYAKN NFKKQLMNLG TKSWLKMMSF VFNQIKAQKS LLKLSVRFCW ALFWAAYVCF
201: LLVGLFIMGF VVSGLTMRRL LEEPIETTKA LNFDYTKTSP VAFAPLASNG LSSPLISKPK IEDRPIPYNH KLQLTVSLTM PESEYNRKLG IFQVRVDCLS
301: SNGKVTATSS YPSMLKFKSQ PIRLVETAIK SIPLVTGFQS EVQNLKLVIN DFTEGFEPTA CFKVVIEKRA EYQSQGAGIP EIYSATLHVE TELPKIKKII
401: WIWRRTVFVW IGILAFLSQL SFSLIFCRTL ILPGRRIMSV LGNKKNVQKN KISW
101: FTSFLAITML KLFGFQMNIL VKLFTFPIFL MNFWIMVLTL PLNTLTYAKN NFKKQLMNLG TKSWLKMMSF VFNQIKAQKS LLKLSVRFCW ALFWAAYVCF
201: LLVGLFIMGF VVSGLTMRRL LEEPIETTKA LNFDYTKTSP VAFAPLASNG LSSPLISKPK IEDRPIPYNH KLQLTVSLTM PESEYNRKLG IFQVRVDCLS
301: SNGKVTATSS YPSMLKFKSQ PIRLVETAIK SIPLVTGFQS EVQNLKLVIN DFTEGFEPTA CFKVVIEKRA EYQSQGAGIP EIYSATLHVE TELPKIKKII
401: WIWRRTVFVW IGILAFLSQL SFSLIFCRTL ILPGRRIMSV LGNKKNVQKN KISW
001: MDSESESESN PSTTDEFDRF LDAPDEFYYD CLPIRSNSHQ PSSLLRRRKS AHRRDLISSD IETEPSSSSD GFDVGEKSSY VEKNAELRGD IDTSDVIEST
101: KDSIDLSSEK ENDLDVISSS GNDMDVIDSG RNRVDPFQEE STVTTVSSDD QGDDDYAGSV PQFREPPNST EWSLLGFLVG LVIKAIEFQV SFMTSLLTFP
201: PWLLRNCFLF FFDPFSTIRF GRRFLMARVA GISDMIFGYM NPFRLKDTKQ MLSIVCKFGW GMFWAVYVGI VLFGLLVSSL MIGGYVINRI ADKPFEVKET
301: LNFDYTKNSP EAYVPISSCA GVECEGSCKE SNEMSKIRGL RVIPRDQKLD IILSMTLPES AYNKNLGMFQ VRVDFLSVDG QTIASIRRPC MLRFRSEPIR
401: LVQTFFKVVP LVTGYVSEIQ TLSLKLKGFV EKDIPTACLK IIIEQRAEFR PGAGIPELYD ASLSVESGLP FFRKIIWKWR KTLFVWISMS LFITELLFTL
501: VCCRPLIIPR TQPRDRSPSN PTGVWR
101: KDSIDLSSEK ENDLDVISSS GNDMDVIDSG RNRVDPFQEE STVTTVSSDD QGDDDYAGSV PQFREPPNST EWSLLGFLVG LVIKAIEFQV SFMTSLLTFP
201: PWLLRNCFLF FFDPFSTIRF GRRFLMARVA GISDMIFGYM NPFRLKDTKQ MLSIVCKFGW GMFWAVYVGI VLFGLLVSSL MIGGYVINRI ADKPFEVKET
301: LNFDYTKNSP EAYVPISSCA GVECEGSCKE SNEMSKIRGL RVIPRDQKLD IILSMTLPES AYNKNLGMFQ VRVDFLSVDG QTIASIRRPC MLRFRSEPIR
401: LVQTFFKVVP LVTGYVSEIQ TLSLKLKGFV EKDIPTACLK IIIEQRAEFR PGAGIPELYD ASLSVESGLP FFRKIIWKWR KTLFVWISMS LFITELLFTL
501: VCCRPLIIPR TQPRDRSPSN PTGVWR
Arabidopsis Description
SEI2Seipin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4I340]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.