Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99253 | Sorghum | plastid | 68.49 | 66.88 |
| Zm00001d021305_P001 | Maize | plastid | 66.3 | 65.58 |
| HORVU5Hr1G082480.1 | Barley | mitochondrion | 61.49 | 60.82 |
| TraesCS5A01G322900.1 | Wheat | cytosol, nucleus, vacuole | 61.05 | 60.13 |
| TraesCS5B01G323400.1 | Wheat | cytosol, nucleus, plasma membrane, plastid | 65.21 | 56.87 |
| Bra032334.1-P | Field mustard | mitochondrion | 18.38 | 43.75 |
| VIT_10s0003g01840.t01 | Wine grape | plasma membrane | 27.79 | 42.91 |
| CDY43679 | Canola | plasma membrane | 32.6 | 42.82 |
| CDY66765 | Canola | cytosol, peroxisome, plasma membrane | 32.82 | 40.98 |
| Bra010814.1-P | Field mustard | plasma membrane | 23.63 | 40.0 |
| GSMUA_Achr9P24190_001 | Banana | cytosol, peroxisome, plasma membrane | 42.45 | 38.11 |
| Bra021906.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 34.14 | 37.41 |
| CDX99851 | Canola | mitochondrion | 31.29 | 34.54 |
| KRH11077 | Soybean | cytosol, nucleus, peroxisome | 36.32 | 32.81 |
| AT2G34380.1 | Thale cress | cytosol, nucleus, plasma membrane | 34.79 | 31.24 |
| CDY35278 | Canola | cytosol, nucleus, plasma membrane | 33.04 | 30.38 |
| AT1G29760.1 | Thale cress | cytosol, nucleus, plasma membrane | 34.35 | 29.85 |
| VIT_19s0014g00840.t01 | Wine grape | plasma membrane | 33.48 | 29.77 |
| CDX90209 | Canola | cytosol, nucleus, plasma membrane | 33.04 | 29.67 |
| PGSC0003DMT400018200 | Potato | cytosol, nucleus, peroxisome | 29.98 | 29.59 |
| Solyc07g062230.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 29.32 | 29.52 |
| KRH59037 | Soybean | cytosol, nucleus, plasma membrane, plastid | 33.26 | 29.17 |
| PGSC0003DMT400073048 | Potato | nucleus | 35.67 | 29.06 |
| Solyc02g071900.2.1 | Tomato | cytosol | 35.67 | 29.06 |
| Os12t0148700-01 | Rice | peroxisome, plasma membrane, plastid | 22.1 | 24.69 |
Protein Annotations
| EntrezGene:4347686 | MapMan:5.9.1 | ProteinID:BAD33332.1 | ProteinID:BAF25686.1 | ProteinID:BAT09129.1 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019915 | EnsemblPlantsGene:Os09g0534000 | EnsemblPlants:Os09t0534000-01 |
| PFAM:PF06775 | PANTHER:PTHR21212 | PANTHER:PTHR21212:SF1 | UniProt:Q69SG4 | InterPro:Seipin | TMHMM:TMhelix |
| UniParc:UPI00003FF36B | RefSeq:XP_015651314.1 | SEG:seg | : | : | : |
Description
Adipose-regulatory protein, Seipin domain containing protein. (Os09t0534000-01)
Coordinates
chr9:-:20983758..20986379
Molecular Weight (calculated)
49885.0 Da
IEP (calculated)
4.933
GRAVY (calculated)
0.047
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MEADEPAAAA ASTSLDSDDS FFDALDSLPS PPSPPHTPSS STLRRRRPRR GWSLKQHEDD TAASPTFSDS STITVVDEAV KPDSEETSSH RPPPPPEEED
101: EEDAAEAAVE GEVEGEVEAR DAKLNPAPAP APTPTPPPPG ILESLAMLVI KAVVFQVSAL ISCLTFPIRL LQWWFLLVTD PLGLVRRARG WALEVAGHAT
201: GAAAARLGGG EGVGRMVARL AWGSLWAVYV CVVLCSILVM AFLGGGLLVG KVVEEPIQVT ETLNFDYTKP SPVAFVPVQR LVPPNQRMQL EVFLTLPESD
301: YNRRLGVFQV RAEFLSADGK VISTSSQPCM LKFKSAHMHF IETFLRSVSL LSGYSSESQV IRLKMRGITE ASEPVMGIRI ILEQRAEFSP GAGIPEIYAA
401: SLKLEAELPL LKRILWNWRW TLFVWSSMGF FVFELLLALI CCRPCIFPRS GHNAATP
101: EEDAAEAAVE GEVEGEVEAR DAKLNPAPAP APTPTPPPPG ILESLAMLVI KAVVFQVSAL ISCLTFPIRL LQWWFLLVTD PLGLVRRARG WALEVAGHAT
201: GAAAARLGGG EGVGRMVARL AWGSLWAVYV CVVLCSILVM AFLGGGLLVG KVVEEPIQVT ETLNFDYTKP SPVAFVPVQR LVPPNQRMQL EVFLTLPESD
301: YNRRLGVFQV RAEFLSADGK VISTSSQPCM LKFKSAHMHF IETFLRSVSL LSGYSSESQV IRLKMRGITE ASEPVMGIRI ILEQRAEFSP GAGIPEIYAA
401: SLKLEAELPL LKRILWNWRW TLFVWSSMGF FVFELLLALI CCRPCIFPRS GHNAATP
001: MDSESESESN PSTTDEFDRF LDAPDEFYYD CLPIRSNSHQ PSSLLRRRKS AHRRDLISSD IETEPSSSSD GFDVGEKSSY VEKNAELRGD IDTSDVIEST
101: KDSIDLSSEK ENDLDVISSS GNDMDVIDSG RNRVDPFQEE STVTTVSSDD QGDDDYAGSV PQFREPPNST EWSLLGFLVG LVIKAIEFQV SFMTSLLTFP
201: PWLLRNCFLF FFDPFSTIRF GRRFLMARVA GISDMIFGYM NPFRLKDTKQ MLSIVCKFGW GMFWAVYVGI VLFGLLVSSL MIGGYVINRI ADKPFEVKET
301: LNFDYTKNSP EAYVPISSCA GVECEGSCKE SNEMSKIRGL RVIPRDQKLD IILSMTLPES AYNKNLGMFQ VRVDFLSVDG QTIASIRRPC MLRFRSEPIR
401: LVQTFFKVVP LVTGYVSEIQ TLSLKLKGFV EKDIPTACLK IIIEQRAEFR PGAGIPELYD ASLSVESGLP FFRKIIWKWR KTLFVWISMS LFITELLFTL
501: VCCRPLIIPR TQPRDRSPSN PTGVWR
101: KDSIDLSSEK ENDLDVISSS GNDMDVIDSG RNRVDPFQEE STVTTVSSDD QGDDDYAGSV PQFREPPNST EWSLLGFLVG LVIKAIEFQV SFMTSLLTFP
201: PWLLRNCFLF FFDPFSTIRF GRRFLMARVA GISDMIFGYM NPFRLKDTKQ MLSIVCKFGW GMFWAVYVGI VLFGLLVSSL MIGGYVINRI ADKPFEVKET
301: LNFDYTKNSP EAYVPISSCA GVECEGSCKE SNEMSKIRGL RVIPRDQKLD IILSMTLPES AYNKNLGMFQ VRVDFLSVDG QTIASIRRPC MLRFRSEPIR
401: LVQTFFKVVP LVTGYVSEIQ TLSLKLKGFV EKDIPTACLK IIIEQRAEFR PGAGIPELYD ASLSVESGLP FFRKIIWKWR KTLFVWISMS LFITELLFTL
501: VCCRPLIIPR TQPRDRSPSN PTGVWR
Arabidopsis Description
SEI2Seipin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4I340]
SUBAcon: [cytosol,nucleus,plasma membrane]
SUBAcon: [cytosol,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.