Factsheet for Solyc08g014030.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037884	Potato	cytosol	89.71	89.5
VIT_00s0226g00070.t01	Wine grape	plastid	67.94	65.14
GSMUA_Achr6P21350_001	Banana	cytosol	61.72	64.34
KRH10104	Soybean	cytosol	65.55	62.7
GSMUA_Achr9P02380_001	Banana	cytosol	61.0	62.35
KRH23228	Soybean	cytosol	66.03	62.3
GSMUA_Achr10P...	Banana	cytosol	55.5	57.71
Solyc02g092370.1.1	Tomato	mitochondrion, nucleus	54.78	45.17
Solyc07g052960.1.1	Tomato	cytosol	28.71	27.97
Solyc02g092570.1.1	Tomato	plastid	28.23	26.94
Solyc03g123400.1.1	Tomato	extracellular, nucleus	25.12	19.37
Solyc12g049320.1.1	Tomato	nucleus	8.13	12.73

Protein Annotations

MapMan:15.5.12	MapMan:26.3.1.4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007049	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008356	GO:GO:0009058	GO:GO:0009956	GO:GO:0009987	GO:GO:0043565	GO:GO:0045930
GO:GO:0048366	GO:GO:0055072	InterPro:IPR005202	UniProt:K4CJ36	PFAM:PF03514	PFscan:PS50985
PANTHER:PTHR31636	PANTHER:PTHR31636:SF36	EnsemblPlantsGene:Solyc08g014030.1	EnsemblPlants:Solyc08g014030.1.1	InterPro:TF_GRAS	UniParc:UPI000276B099
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:3631250..3632506

Molecular Weight (calculated)

47723.7 Da

IEP (calculated)

5.378

GRAVY (calculated)

-0.380

Length

418 amino acids

Sequence
(BLAST)

001: MQNPNYHENS SSSRSESPEG VEPVSDAKWA PKLLHECATA ISNKDSTKIH HLLWMLNELA SPYGDCNQKL AFYFLQALFC KATDTGLRCY KTLTSAAEKS
101: KSFDSSRKLI LKFQEVSPWT TFGHVASNGA ILEALDGENK LHIIDISNTF CTQWPTLLEA LATRNDETPH LKLTVVVMES TLVKSHVMKE VAQRMEKFAR
201: LMGVPFEFNV ISGLNHLKEL TKESLNIKEE EALAVNCIGA LRRVEVDERG AFIRMIQSLN PKVVTIVEHE ADFSSTRNDF VKCFEECLRF YTLYFEMLDE
301: SFPTTSNERL VIERECSKCI VKVLACDNDI GDDQGYSERR ERGNQWCERL KECFTPFTLN DDAVDDVKAL LKRYKAGWSL VLPQANQESP GIYLTWREQQ
401: VVWASSWKPQ EKSMEVET

Best Arabidopsis Sequence Match ( AT4G37650.1 )
(BLAST)

001: MDTLFRLVSL QQQQQSDSII TNQSSLSRTS TTTTGSPQTA YHYNFPQNDV VEECFNFFMD EEDLSSSSSH HNHHNHNNPN TYYSPFTTPT QYHPATSSTP
101: SSTAAAAALA SPYSSSGHHN DPSAFSIPQT PPSFDFSANA KWADSVLLEA ARAFSDKDTA RAQQILWTLN ELSSPYGDTE QKLASYFLQA LFNRMTGSGE
201: RCYRTMVTAA ATEKTCSFES TRKTVLKFQE VSPWATFGHV AANGAILEAV DGEAKIHIVD ISSTFCTQWP TLLEALATRS DDTPHLRLTT VVVANKFVND
301: QTASHRMMKE IGNRMEKFAR LMGVPFKFNI IHHVGDLSEF DLNELDVKPD EVLAINCVGA MHGIASRGSP RDAVISSFRR LRPRIVTVVE EEADLVGEEE
401: GGFDDEFLRG FGECLRWFRV CFESWEESFP RTSNERLMLE RAAGRAIVDL VACEPSDSTE RRETARKWSR RMRNSGFGAV GYSDEVADDV RALLRRYKEG
501: VWSMVQCPDA AGIFLCWRDQ PVVWASAWRP T

Arabidopsis Description

SHRSHR [Source:UniProtKB/TrEMBL;Acc:A0A178UYJ6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.