Factsheet for TraesCS1A01G118400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G119500.1	Wheat	nucleus	84.73	86.87
TraesCS1B01G138100.1	Wheat	cytosol	84.73	86.87
HORVU1Hr1G025670.3	Barley	nucleus	83.25	84.5
Os05t0178600-01	Rice	nucleus	69.46	66.51
TraesCS3A01G121300.2	Wheat	nucleus	61.08	61.39
EES19135	Sorghum	nucleus, plastid	60.59	60.89
TraesCS7A01G371500.1	Wheat	cytosol, nucleus, plastid	47.29	53.04
GSMUA_Achr9P02960_001	Banana	nucleus	47.78	46.86
GSMUA_AchrUn_...	Banana	nucleus	48.28	44.75
KRH23505	Soybean	nucleus	39.41	43.72
KRH09810	Soybean	nucleus	39.41	42.33
PGSC0003DMT400006798	Potato	nucleus	42.36	40.57
VIT_11s0016g04490.t01	Wine grape	cytosol, nucleus, plastid	42.36	39.81
GSMUA_Achr4P08960_001	Banana	nucleus	46.8	34.93
Solyc03g120390.2.1	Tomato	nucleus, plastid	42.86	34.52
TraesCS5A01G058600.1	Wheat	nucleus	41.38	33.2
TraesCS5A01G382600.1	Wheat	nucleus	37.93	33.05
TraesCS7A01G331100.1	Wheat	nucleus	36.95	31.25
VIT_09s0002g05160.t01	Wine grape	nucleus	42.86	29.59
TraesCS3A01G270000.1	Wheat	nucleus, plastid	36.95	28.74
TraesCS5A01G058700.1	Wheat	cytosol	30.05	28.5
GSMUA_Achr7P13250_001	Banana	nucleus	40.89	27.95
TraesCS5A01G378200.1	Wheat	nucleus	29.06	27.83
TraesCS3A01G155200.1	Wheat	cytosol	33.0	27.35
TraesCS1A01G390200.1	Wheat	plastid	34.48	26.82
TraesCS5A01G378300.2	Wheat	cytosol, mitochondrion, nucleus	37.44	24.92

Protein Annotations

EnsemblPlants:TraesCS1A01G118400.2	EnsemblPlantsGene:TraesCS1A01G118400	Gene3D:3.10.20.90	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	PANTHER:PTHR31734	PANTHER:PTHR31734:SF86	PFAM:PF02309
SEG:seg	SUPFAM:SSF54277	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1A:-:127076823..127077522

Molecular Weight (calculated)

21549.1 Da

IEP (calculated)

4.639

GRAVY (calculated)

-0.248

Length

203 amino acids

Sequence
(BLAST)

001: MSVETERSST ESSAASGLDF EDTALTLRLP GSDPDRKRAS TSDPDCPSPT AAASDSPPSP KAQVVGWPPV RSFRKNALAA AASSKTKFVK VAVDGAPYLR
101: KVDLKAYAGY TSSASYDQLL ATLQDKFISH LTVRECTAAT CHACVCVLAT CCSLVGSDDL TVDAGKLGNE EMKLVDAVSG TEYVPTYEDK DGDWMLVGDV
201: PWR

Best Arabidopsis Sequence Match ( AT2G22670.2 )
(BLAST)

001: MSYRLLSVDK DELVTSPCLK ERNYLGLSDC SSVDSSTIPN VVGKSNLNFK ATELRLGLPE SQSPERETDF GLLSPRTPDE KLLFPLLPSK DNGSATTGHK
101: NVVSGNKRGF ADTWDEFSGV KGSVRPGGGI NMMLSPKVKD VSKSIQEERS HAKGGLNNAP AAKAQVVGWP PIRSYRKNTM ASSTSKNTDE VDGKPGLGVL
201: FVKVSMDGAP YLRKVDLRTY TSYQQLSSAL EKMFSCFTLG QCGLHGAQGR ERMSEIKLKD LLHGSEFVLT YEDKDGDWML VGDVPWEIFT ETCQKLKIMK
301: GSDSIGLGAV EKSKNKERV

Arabidopsis Description

IAA8Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F4IKE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.