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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G138100.1 Wheat cytosol 99.49 99.49
HORVU1Hr1G025670.3 Barley nucleus 97.98 97.0
TraesCS1A01G118400.2 Wheat cytosol 86.87 84.73
Os05t0178600-01 Rice nucleus 78.79 73.58
EES19135 Sorghum nucleus, plastid 73.23 71.78
TraesCS3D01G123400.1 Wheat nucleus 62.63 70.45
TraesCS7D01G351400.1 Wheat cytosol, nucleus, plastid 58.08 63.89
GSMUA_Achr9P02960_001 Banana nucleus 57.58 55.07
KRH23505 Soybean nucleus 48.99 53.01
GSMUA_AchrUn_... Banana nucleus 58.59 52.97
KRH09810 Soybean nucleus 48.99 51.32
PGSC0003DMT400006798 Potato nucleus 52.02 48.58
VIT_11s0016g04490.t01 Wine grape cytosol, nucleus, plastid 52.02 47.69
Solyc03g120390.2.1 Tomato nucleus, plastid 52.53 41.27
GSMUA_Achr4P08960_001 Banana nucleus 55.05 40.07
TraesCS5D01G392000.1 Wheat nucleus 45.96 39.22
TraesCS5D01G069300.1 Wheat nucleus 48.48 38.1
TraesCS7D01G339300.1 Wheat nucleus 44.44 36.67
TraesCS5D01G449400.1 Wheat nucleus 33.33 36.46
VIT_09s0002g05160.t01 Wine grape nucleus 52.02 35.03
TraesCS3D01G162700.1 Wheat cytosol 40.4 33.76
TraesCS5D01G069200.1 Wheat cytosol 36.36 33.64
TraesCS5D01G388200.1 Wheat nucleus 36.36 33.49
GSMUA_Achr7P13250_001 Banana nucleus 50.0 33.33
TraesCS3D01G269700.1 Wheat nucleus, plastid 41.41 31.66
TraesCS1D01G398400.1 Wheat nucleus 39.39 29.55
TraesCS5D01G388300.2 Wheat cytosol 44.44 27.94
Protein Annotations
Gene3D:3.10.20.90MapMan:35.1InterPro:AUX/IAA_domInterPro:AUX_IAAGO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR000270
InterPro:PB1_domPFAM:PF02309PFscan:PS51745PANTHER:PTHR31734PANTHER:PTHR31734:SF86SUPFAM:SSF54277
EnsemblPlantsGene:TraesCS1D01G119500EnsemblPlants:TraesCS1D01G119500.1SEG:seg:::
Description
No Description!
Coordinates
chr1D:-:116003366..116005297
Molecular Weight (calculated)
21525.3 Da
IEP (calculated)
7.256
GRAVY (calculated)
-0.432
Length
198 amino acids
Sequence
(BLAST)
001: MSVETERSST ESSAASGLDF EDTALTLRLP GSDPDRKRAS TSDPDCPSPT AAASDSPPSP KAQVVGWPPV RSFRKNALAA AASSKTKFVK VAVDGAPYLR
101: KVDLKAYAGY TSSASYDQLL ATLQDKFISH LTVRKLGNEE MKLVDAVSGT EYVPTYEDKD GDWMLVGDVP WRMFVETCQR IRLMKSSEVV NLAPRSGR
Best Arabidopsis Sequence Match ( AT1G04250.1 )
(BLAST)
001: MMGSVELNLR ETELCLGLPG GDTVAPVTGN KRGFSETVDL KLNLNNEPAN KEGSTTHDVV TFDSKEKSAC PKDPAKPPAK AQVVGWPPVR SYRKNVMVSC
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA
Arabidopsis Description
IAA17Auxin-responsive protein IAA17 [Source:UniProtKB/Swiss-Prot;Acc:P93830]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.