Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1B01G138100.1 | Wheat | cytosol | 99.49 | 99.49 |
HORVU1Hr1G025670.3 | Barley | nucleus | 97.98 | 97.0 |
TraesCS1A01G118400.2 | Wheat | cytosol | 86.87 | 84.73 |
Os05t0178600-01 | Rice | nucleus | 78.79 | 73.58 |
EES19135 | Sorghum | nucleus, plastid | 73.23 | 71.78 |
TraesCS3D01G123400.1 | Wheat | nucleus | 62.63 | 70.45 |
TraesCS7D01G351400.1 | Wheat | cytosol, nucleus, plastid | 58.08 | 63.89 |
GSMUA_Achr9P02960_001 | Banana | nucleus | 57.58 | 55.07 |
KRH23505 | Soybean | nucleus | 48.99 | 53.01 |
GSMUA_AchrUn_... | Banana | nucleus | 58.59 | 52.97 |
KRH09810 | Soybean | nucleus | 48.99 | 51.32 |
PGSC0003DMT400006798 | Potato | nucleus | 52.02 | 48.58 |
VIT_11s0016g04490.t01 | Wine grape | cytosol, nucleus, plastid | 52.02 | 47.69 |
Solyc03g120390.2.1 | Tomato | nucleus, plastid | 52.53 | 41.27 |
GSMUA_Achr4P08960_001 | Banana | nucleus | 55.05 | 40.07 |
TraesCS5D01G392000.1 | Wheat | nucleus | 45.96 | 39.22 |
TraesCS5D01G069300.1 | Wheat | nucleus | 48.48 | 38.1 |
TraesCS7D01G339300.1 | Wheat | nucleus | 44.44 | 36.67 |
TraesCS5D01G449400.1 | Wheat | nucleus | 33.33 | 36.46 |
VIT_09s0002g05160.t01 | Wine grape | nucleus | 52.02 | 35.03 |
TraesCS3D01G162700.1 | Wheat | cytosol | 40.4 | 33.76 |
TraesCS5D01G069200.1 | Wheat | cytosol | 36.36 | 33.64 |
TraesCS5D01G388200.1 | Wheat | nucleus | 36.36 | 33.49 |
GSMUA_Achr7P13250_001 | Banana | nucleus | 50.0 | 33.33 |
TraesCS3D01G269700.1 | Wheat | nucleus, plastid | 41.41 | 31.66 |
TraesCS1D01G398400.1 | Wheat | nucleus | 39.39 | 29.55 |
TraesCS5D01G388300.2 | Wheat | cytosol | 44.44 | 27.94 |
Protein Annotations
Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR000270 |
InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF86 | SUPFAM:SSF54277 |
EnsemblPlantsGene:TraesCS1D01G119500 | EnsemblPlants:TraesCS1D01G119500.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:-:116003366..116005297
Molecular Weight (calculated)
21525.3 Da
IEP (calculated)
7.256
GRAVY (calculated)
-0.432
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVETERSST ESSAASGLDF EDTALTLRLP GSDPDRKRAS TSDPDCPSPT AAASDSPPSP KAQVVGWPPV RSFRKNALAA AASSKTKFVK VAVDGAPYLR
101: KVDLKAYAGY TSSASYDQLL ATLQDKFISH LTVRKLGNEE MKLVDAVSGT EYVPTYEDKD GDWMLVGDVP WRMFVETCQR IRLMKSSEVV NLAPRSGR
101: KVDLKAYAGY TSSASYDQLL ATLQDKFISH LTVRKLGNEE MKLVDAVSGT EYVPTYEDKD GDWMLVGDVP WRMFVETCQR IRLMKSSEVV NLAPRSGR
001: MMGSVELNLR ETELCLGLPG GDTVAPVTGN KRGFSETVDL KLNLNNEPAN KEGSTTHDVV TFDSKEKSAC PKDPAKPPAK AQVVGWPPVR SYRKNVMVSC
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA
101: QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV
201: DTCKRLRLMK GSDAIGLAPR AMEKCKSRA
Arabidopsis Description
IAA17Auxin-responsive protein IAA17 [Source:UniProtKB/Swiss-Prot;Acc:P93830]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.