Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G002110.1 | Barley | vacuole | 15.12 | 100.0 |
| TraesCS2A01G103300.1 | Wheat | nucleus | 97.65 | 97.65 |
| TraesCS2B01G120600.1 | Wheat | nucleus | 96.98 | 96.98 |
| Os07t0681600-01 | Rice | nucleus | 75.14 | 75.73 |
| EER97745 | Sorghum | nucleus | 74.92 | 74.25 |
| Solyc09g018710.2.1 | Tomato | cytosol | 29.9 | 65.12 |
| VIT_06s0004g08420.t01 | Wine grape | nucleus | 36.84 | 60.26 |
| KRH30702 | Soybean | nucleus | 52.18 | 53.5 |
| KRG98073 | Soybean | nucleus | 55.1 | 53.48 |
| GSMUA_Achr10P... | Banana | nucleus | 52.41 | 50.27 |
| TraesCS4D01G133500.1 | Wheat | nucleus | 21.61 | 27.45 |
| TraesCS4D01G144400.2 | Wheat | nucleus | 17.81 | 25.6 |
| TraesCS6D01G320500.1 | Wheat | nucleus | 21.39 | 24.68 |
| TraesCS1D01G100000.1 | Wheat | nucleus | 20.6 | 21.75 |
| TraesCS2D01G303500.1 | Wheat | nucleus | 23.74 | 17.65 |
| TraesCS2D01G344000.2 | Wheat | nucleus | 16.91 | 16.08 |
Protein Annotations
Description
No Description!
Coordinates
chr2D:-:55391357..55400008
Molecular Weight (calculated)
98957.4 Da
IEP (calculated)
6.933
GRAVY (calculated)
-0.284
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAALKRYFG YTGFRPYQRE IVDTIMQGRD CLVVMATGSG KSMCYQIPPL VAKKTAVVVS PLLSLMQDQV MSLKQHGVRS EYLGSTQMNS SVSSEAEKGM
101: YDVLYMTPEK AIALPSRFWS NLQASGICLF AIDEAHCISE WGHDFRPEYK QLHLLREHLL GVPFVALTAT ATERVRGDIA NSLNLSNPHV AIGSFDRPNL
201: FYGVKSCNRS MSFISELVQD VSKNCTVGGS TIIYCTTIRD TEQVHEAMIA AGIKANIYHG KMGSKAREES HRSFVRDEVL VMVATIAFGM GIDKPDVRCV
301: IHYGCPKSLE SYYQESGRCG RDGLPSVCWL YYQRSDFAKA DFYCSEATNA TQKNAIMDSF MAAQKYCLLA TCRRKSLLQY FGEERYTDCG NCDNCTGTKN
401: ERDLSKESFL LLSCVKSCGG RWGLNMPVDV LRGSRVKKIV EKNYDKLPMH AMGKDYPPNW WKALGSLLMA HGYLKETVSD GFRLVSVSPK GVKFLSDGGT
501: PLVLQLTAEM IGQEEQGSLQ NKEGGLNPST TAESEKISEE ELKLYQMLLN VRMKLAQDIG TAPYAICGDQ TLRHFAKIRP STGARLANID GVNQHFISRY
601: SGTFVQNIAQ FSKQLNLSLD DSSGVEDMMS VPKPVNNSLP RNLGDAKFTS WELWQKQEYS FKKIAHFRRA VPIKEQTVIS YILDAARDGC EMNWNRFFEE
701: TGLTPEIASQ IRLAIAKVGS RERLKPIKEE LPENITYEMI KIFFAADDLG VLEKTFGNAP TDGSPAQTAE SAKPCSHGSE ALEKGDPGDP VIISGACDSS
801: AATKRSQTDG TLLSADEPVK KLQKIEEQGT EPTTANVATE DAILELAASR NGVSLEDAVK HFSGSKRESV VEMLESLRCS FAVYMKNGCY LVL
101: YDVLYMTPEK AIALPSRFWS NLQASGICLF AIDEAHCISE WGHDFRPEYK QLHLLREHLL GVPFVALTAT ATERVRGDIA NSLNLSNPHV AIGSFDRPNL
201: FYGVKSCNRS MSFISELVQD VSKNCTVGGS TIIYCTTIRD TEQVHEAMIA AGIKANIYHG KMGSKAREES HRSFVRDEVL VMVATIAFGM GIDKPDVRCV
301: IHYGCPKSLE SYYQESGRCG RDGLPSVCWL YYQRSDFAKA DFYCSEATNA TQKNAIMDSF MAAQKYCLLA TCRRKSLLQY FGEERYTDCG NCDNCTGTKN
401: ERDLSKESFL LLSCVKSCGG RWGLNMPVDV LRGSRVKKIV EKNYDKLPMH AMGKDYPPNW WKALGSLLMA HGYLKETVSD GFRLVSVSPK GVKFLSDGGT
501: PLVLQLTAEM IGQEEQGSLQ NKEGGLNPST TAESEKISEE ELKLYQMLLN VRMKLAQDIG TAPYAICGDQ TLRHFAKIRP STGARLANID GVNQHFISRY
601: SGTFVQNIAQ FSKQLNLSLD DSSGVEDMMS VPKPVNNSLP RNLGDAKFTS WELWQKQEYS FKKIAHFRRA VPIKEQTVIS YILDAARDGC EMNWNRFFEE
701: TGLTPEIASQ IRLAIAKVGS RERLKPIKEE LPENITYEMI KIFFAADDLG VLEKTFGNAP TDGSPAQTAE SAKPCSHGSE ALEKGDPGDP VIISGACDSS
801: AATKRSQTDG TLLSADEPVK KLQKIEEQGT EPTTANVATE DAILELAASR NGVSLEDAVK HFSGSKRESV VEMLESLRCS FAVYMKNGCY LVL
001: MESEAIQEDL QNLDVELKDV QGQISALIEH QDRLYERKSE LKTLLKALAA SGSPVASSGG SSAIENWSET FEWDSRADDV RFNVFGISKY RANQKEIINA
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLS
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLS
Arabidopsis Description
RECQL2RECQ helicase L2 [Source:TAIR;Acc:AT1G31360]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.