Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30702 | Soybean | nucleus | 89.57 | 94.6 |
| VIT_06s0004g08420.t01 | Wine grape | nucleus | 42.5 | 71.61 |
| HORVU0Hr1G002110.1 | Barley | vacuole | 10.43 | 71.11 |
| Solyc09g018710.2.1 | Tomato | cytosol | 30.65 | 68.78 |
| Os07t0681600-01 | Rice | nucleus | 53.15 | 55.19 |
| TraesCS2D01G102800.1 | Wheat | nucleus | 53.48 | 55.1 |
| TraesCS2A01G103300.1 | Wheat | nucleus | 53.48 | 55.1 |
| EER97745 | Sorghum | nucleus | 53.91 | 55.05 |
| TraesCS2B01G120600.1 | Wheat | nucleus | 53.26 | 54.87 |
| GSMUA_Achr10P... | Banana | nucleus | 50.87 | 50.27 |
| KRH39703 | Soybean | nucleus | 22.17 | 29.35 |
| KRH42322 | Soybean | cytosol, nucleus, plastid | 4.78 | 29.14 |
| KRH00028 | Soybean | cytosol | 2.28 | 28.0 |
| KRH37506 | Soybean | nucleus | 20.98 | 25.94 |
| KRH33841 | Soybean | nucleus | 16.2 | 24.43 |
| KRG92892 | Soybean | nucleus | 19.57 | 21.08 |
| KRH42323 | Soybean | cytosol | 6.52 | 18.63 |
| KRH26366 | Soybean | nucleus | 22.39 | 17.88 |
| KRH44073 | Soybean | nucleus | 22.5 | 17.84 |
| KRH42637 | Soybean | nucleus | 15.33 | 15.6 |
| KRH58739 | Soybean | cytosol | 2.17 | 11.49 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr18:-:4203622..4221206
Molecular Weight (calculated)
103178.0 Da
IEP (calculated)
6.598
GRAVY (calculated)
-0.312
Length
920 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVETMCSVL KKYFGFSDFR PYQREVIEKI IEKRDCLVVM ATGSGKSLCY QVPPLVAKKT GIVVSPLISL MQDQVMALKQ RGIKAEYLGS AQKDFTVHSK
101: AEHGQFDILF MTPEKACTVP SSFWSNLLKA GISLFAVDEA HCISEWGHDF RVEYKHLDKL REVLLDVPFV GLTATATEKV RYDIISSLKL NNPYVTIGSF
201: DRTNLFYGVK LLNRGQSFID ELVREISKEV TNGGSTIIYC TTIKDVEQIF KSFAEAGIEA GMYHGQMNGK AREESHRLFV RDELQVMVAT IAFGMGIDKP
301: NIRQVIHYGC PKSLESYYQE SGRCGRDGIA SVCWLYYTRS DFAKGDFYCG DVKSEKQRKA IMESLLAAER YCVLTTCRRK FLLEYFGEKF PADRCGNCDN
401: CKISRKERDM SREAFLLMAC IHSCRGIWGL NMPIDVLRGS RAKKILDVQF DKLPLHGLGK NYPANWWKAL RHQLISQGYL KEIVSDRYRT ISVSSKGEQF
501: LASSRPDYQP PLVLTLTAEM LGEEDNGNTQ EAFKTLSTSE SEGFSEAEGQ LYQMLLEERL KLARSVGTAP YAICGDQTIK KIALTRPSTK ARLANIDGVN
601: QHLVTEYGDD FLQVIQKLSQ VLNLSLDGEA RVATASLQTN EVRKVSLVTN KSNKLTPAKF EAWKKWHEDG CSIHEIANFP GRSAPIKEQS VAEYLLEAAQ
701: EGLPFDWARF SEMIGLTQGI ISEIQGAISK VGSTDKLKPI KNELPEEISY QHIKTYLTMR NCGISLEAIQ SGSNQTGKDD EPAHNASNLS DPTLETCHVE
801: RYCEDGISAK SSLEKWDLEI DEVPILPVNG SEVQKLPLVC EGEFTNKRQK VSETKEVNST KLKATESSVV EWLKNLDEGA TLSDVLEHFN GSSKDSVVEL
901: LNCLQSDFSI YSKGGTYKIL
101: AEHGQFDILF MTPEKACTVP SSFWSNLLKA GISLFAVDEA HCISEWGHDF RVEYKHLDKL REVLLDVPFV GLTATATEKV RYDIISSLKL NNPYVTIGSF
201: DRTNLFYGVK LLNRGQSFID ELVREISKEV TNGGSTIIYC TTIKDVEQIF KSFAEAGIEA GMYHGQMNGK AREESHRLFV RDELQVMVAT IAFGMGIDKP
301: NIRQVIHYGC PKSLESYYQE SGRCGRDGIA SVCWLYYTRS DFAKGDFYCG DVKSEKQRKA IMESLLAAER YCVLTTCRRK FLLEYFGEKF PADRCGNCDN
401: CKISRKERDM SREAFLLMAC IHSCRGIWGL NMPIDVLRGS RAKKILDVQF DKLPLHGLGK NYPANWWKAL RHQLISQGYL KEIVSDRYRT ISVSSKGEQF
501: LASSRPDYQP PLVLTLTAEM LGEEDNGNTQ EAFKTLSTSE SEGFSEAEGQ LYQMLLEERL KLARSVGTAP YAICGDQTIK KIALTRPSTK ARLANIDGVN
601: QHLVTEYGDD FLQVIQKLSQ VLNLSLDGEA RVATASLQTN EVRKVSLVTN KSNKLTPAKF EAWKKWHEDG CSIHEIANFP GRSAPIKEQS VAEYLLEAAQ
701: EGLPFDWARF SEMIGLTQGI ISEIQGAISK VGSTDKLKPI KNELPEEISY QHIKTYLTMR NCGISLEAIQ SGSNQTGKDD EPAHNASNLS DPTLETCHVE
801: RYCEDGISAK SSLEKWDLEI DEVPILPVNG SEVQKLPLVC EGEFTNKRQK VSETKEVNST KLKATESSVV EWLKNLDEGA TLSDVLEHFN GSSKDSVVEL
901: LNCLQSDFSI YSKGGTYKIL
001: MESEAIQEDL QNLDVELKDV QGQISALIEH QDRLYERKSE LKTLLKALAA SGSPVASSGG SSAIENWSET FEWDSRADDV RFNVFGISKY RANQKEIINA
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLS
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLS
Arabidopsis Description
RECQL2RECQ helicase L2 [Source:TAIR;Acc:AT1G31360]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.