Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0708600-02 | Rice | nucleus | 57.55 | 76.48 |
| Solyc08g074610.1.1 | Tomato | nucleus | 57.7 | 72.91 |
| VIT_02s0087g00070.t01 | Wine grape | nucleus | 77.99 | 72.56 |
| HORVU0Hr1G008030.1 | Barley | nucleus | 37.12 | 72.07 |
| Bra038422.1-P | Field mustard | nucleus | 72.37 | 71.35 |
| GSMUA_Achr4P27590_001 | Banana | nucleus | 72.81 | 70.97 |
| TraesCS4A01G178600.5 | Wheat | nucleus | 70.65 | 69.74 |
| PGSC0003DMT400076140 | Potato | cytosol, nucleus, plasma membrane | 19.86 | 69.7 |
| TraesCS4D01G133500.1 | Wheat | nucleus | 70.36 | 69.56 |
| KXG38755 | Sorghum | nucleus | 70.65 | 69.15 |
| TraesCS4B01G138800.1 | Wheat | nucleus | 69.78 | 69.09 |
| AT1G31360.3 | Thale cress | nucleus | 72.66 | 68.34 |
| CDY12420 | Canola | nucleus | 72.52 | 60.87 |
| Zm00001d030366_P007 | Maize | nucleus | 65.61 | 58.16 |
| KRH00028 | Soybean | cytosol | 4.75 | 44.0 |
| KRH42322 | Soybean | cytosol, nucleus, plastid | 7.63 | 35.1 |
| KRH33841 | Soybean | nucleus | 25.18 | 28.69 |
| KRH37506 | Soybean | nucleus | 26.04 | 24.33 |
| KRH42323 | Soybean | cytosol | 10.94 | 23.6 |
| KRH30702 | Soybean | nucleus | 29.5 | 23.54 |
| KRH26366 | Soybean | nucleus | 37.55 | 22.66 |
| KRH44073 | Soybean | nucleus | 37.27 | 22.33 |
| KRG98073 | Soybean | nucleus | 29.35 | 22.17 |
| KRG92892 | Soybean | nucleus | 23.45 | 19.09 |
| KRH42637 | Soybean | nucleus | 21.73 | 16.7 |
| KRH58739 | Soybean | cytosol | 2.73 | 10.92 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr9:+:43872019..43882157
Molecular Weight (calculated)
78840.9 Da
IEP (calculated)
7.055
GRAVY (calculated)
-0.362
Length
695 amino acids
Sequence
(BLAST)
(BLAST)
001: MENNEILEEL LNIEVEIQDV QEQIRALIER QESLYERKSE LSAILEACKE SGNEANNAAS SAAENWSGEF EWDSEADDVR LNVFGISSYR ANQREIINAI
101: MSGRDVLVIM AAGGGKSLCY QLPAVLRDGI ALVVSPLLSL IQDQVMGLTA LGIPAYMLTS TNKGDEKFIY KTLEKGEGEL KILYVTPEKI SKSKRFMSKL
201: EKCHHAGRLS LISIDEAHCC SQWGHDFRPD YKSLSILKTQ FPRVPIVALT ATATQRVQND LIEMLHIPRC VKFVSTVNRP NLFYMVKEKS SVGKVVIDEI
301: AEFIQESYPN NESGIVYCFS RKECEQVAKE LRERGISADY YHADMDVNAR EKVHMRWSNN KLQVIVGTVA FGMGINKPDV RFVIHHSLSK SMETYYQESG
401: RAGRDGLPSE CLLYFRPGDA PRQSSMVFYE NSGLQNLYDI VRYCLSKRQC RRSAFFHHFA EPLQECNGMC DICAFSSEVK EVDVSGHAKL MVSLLQDMQA
501: NDQRSTMLQL VDKMKIKQKE LGSELKREEI EQLILHLLLA RFLKEEFQHT PYATNAYIAV GSLAKQILQG KKSVKLEIYT EQRTKDGVRS AKQCLGSSGL
601: ELKLDELRKE LSSAHGGILP HSVLSTEQII QLASQKPNSL EQLEKLIGKL RTEKYGNRIL KQIEKYYDFE PTDKQEIDAR AAKRLKSKKN LVIIE
101: MSGRDVLVIM AAGGGKSLCY QLPAVLRDGI ALVVSPLLSL IQDQVMGLTA LGIPAYMLTS TNKGDEKFIY KTLEKGEGEL KILYVTPEKI SKSKRFMSKL
201: EKCHHAGRLS LISIDEAHCC SQWGHDFRPD YKSLSILKTQ FPRVPIVALT ATATQRVQND LIEMLHIPRC VKFVSTVNRP NLFYMVKEKS SVGKVVIDEI
301: AEFIQESYPN NESGIVYCFS RKECEQVAKE LRERGISADY YHADMDVNAR EKVHMRWSNN KLQVIVGTVA FGMGINKPDV RFVIHHSLSK SMETYYQESG
401: RAGRDGLPSE CLLYFRPGDA PRQSSMVFYE NSGLQNLYDI VRYCLSKRQC RRSAFFHHFA EPLQECNGMC DICAFSSEVK EVDVSGHAKL MVSLLQDMQA
501: NDQRSTMLQL VDKMKIKQKE LGSELKREEI EQLILHLLLA RFLKEEFQHT PYATNAYIAV GSLAKQILQG KKSVKLEIYT EQRTKDGVRS AKQCLGSSGL
601: ELKLDELRKE LSSAHGGILP HSVLSTEQII QLASQKPNSL EQLEKLIGKL RTEKYGNRIL KQIEKYYDFE PTDKQEIDAR AAKRLKSKKN LVIIE
001: MESEAIQEDL QNLDVELKDV QGQISALIEH QDRLYERKSE LKTLLKALAA SGSPVASSGG SSAIENWSET FEWDSRADDV RFNVFGISKY RANQKEIINA
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLIAELKRD EVEHLVIKLI VDSVLKEEFQ HTPYSTNAYV TMGPLANQLL QGRKTIKMET SSRQTKKLKR SITFSGLELK
601: LDELRKEISA ADGSILPHTV LSTQQIGSIS SQKPVSLQEL ESIIGKLKTE KYGDRILEEV MRHEAVSEQL VEDPTKEETC KSRLRKRAKT QKDVVLVESS
701: GEEEA
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLIAELKRD EVEHLVIKLI VDSVLKEEFQ HTPYSTNAYV TMGPLANQLL QGRKTIKMET SSRQTKKLKR SITFSGLELK
601: LDELRKEISA ADGSILPHTV LSTQQIGSIS SQKPVSLQEL ESIIGKLKTE KYGDRILEEV MRHEAVSEQL VEDPTKEETC KSRLRKRAKT QKDVVLVESS
701: GEEEA
Arabidopsis Description
RECQL2RECQ helicase L2 [Source:TAIR;Acc:AT1G31360]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.