Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G075870.8 | Barley | nucleus, plastid | 52.0 | 6.27 |
| KRH33841 | Soybean | nucleus | 49.33 | 6.07 |
| KRH26366 | Soybean | nucleus | 86.67 | 5.64 |
| KRH44073 | Soybean | nucleus | 86.67 | 5.6 |
| CDY34859 | Canola | nucleus | 73.33 | 4.84 |
| VIT_12s0035g00400.t01 | Wine grape | nucleus | 73.33 | 4.75 |
| KRH39703 | Soybean | nucleus | 44.0 | 4.75 |
| CDY34669 | Canola | nucleus | 73.33 | 4.75 |
| CDY20972 | Canola | nucleus | 74.67 | 4.73 |
| Bra031741.1-P | Field mustard | nucleus | 73.33 | 4.73 |
| AT1G10930.1 | Thale cress | nucleus | 74.67 | 4.71 |
| Bra018418.1-P | Field mustard | nucleus | 74.67 | 4.68 |
| Solyc01g103960.2.1 | Tomato | nucleus | 73.33 | 4.66 |
| KRH42323 | Soybean | cytosol | 20.0 | 4.66 |
| CDY20595 | Canola | nucleus | 73.33 | 4.64 |
| CDY40476 | Canola | nucleus | 69.33 | 4.62 |
| CDY12873 | Canola | nucleus | 69.33 | 4.61 |
| GSMUA_Achr6P17780_001 | Banana | nucleus | 72.0 | 4.55 |
| Bra027115.1-P | Field mustard | nucleus | 69.33 | 4.49 |
| KRH37506 | Soybean | nucleus | 41.33 | 4.17 |
| Os04t0433800-01 | Rice | nucleus | 66.67 | 4.13 |
| TraesCS2D01G303500.1 | Wheat | nucleus | 65.33 | 4.08 |
| TraesCS2B01G321700.1 | Wheat | nucleus | 65.33 | 4.08 |
| TraesCS2A01G304900.1 | Wheat | nucleus | 65.33 | 4.08 |
| Zm00001d015212_P006 | Maize | nucleus | 62.67 | 4.0 |
| EES06253 | Sorghum | nucleus | 58.67 | 3.68 |
| KRG92892 | Soybean | nucleus | 33.33 | 2.93 |
| KRH42637 | Soybean | nucleus | 32.0 | 2.65 |
| KRH30702 | Soybean | nucleus | 28.0 | 2.41 |
| KRG98073 | Soybean | nucleus | 28.0 | 2.28 |
| KRH58739 | Soybean | cytosol | 0.0 | 0.0 |
| KRH42322 | Soybean | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02011363 | EnsemblPlants:KRH00028 | EnsemblPlantsGene:GLYMA_18G186600 | Gene3D:3.40.50.300 | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:P-loop_NTPase |
| PANTHER:PTHR13710 | PANTHER:PTHR13710:SF105 | ProteinID:KRH00028 | ProteinID:KRH00028.1 | ScanProsite:PS00690 | SUPFAM:SSF52540 |
| UniParc:UPI0002954FE5 | UniProt:K7MT79 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:44884226..44884581
Molecular Weight (calculated)
9085.0 Da
IEP (calculated)
7.575
GRAVY (calculated)
-0.181
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MELNFDYCKY KLLYVTPEKV ARSDNLLRHL DNLHFRELLA RIVIDEAHCV SQWGHDFRLD YQVRALVPFK FMQIT
0001: MINSNQMSRS HLPEVQKPRG PQTNWSEHAK ALESSSSVTK FLSSNVLYAL ESQKPRDMAA RSIAFPSVNV HTLAHPQISK AWRALSSLSV NNTYLRPGVT
0101: PPIDVGTNDS YSARERSTAK VISSTGGSVY SSTRPNLSAM NVSGTGRSFH SFPSSVPGDD KIVAEKFPRG NNEIRESEPS CTHLNGVEKS FGNSAFPAEQ
0201: FESRKACLDD MDDDDILENI DVDQIVMEHY HSTSTPQPSV SNFSLRTPPV DRSASRLEEE CNLPPELCSN CSHGIKLGLC PEASTHVEQM KDVLLAISNE
0301: LLDDATDLSP DRVGQLRQER LRLKKQIQQL ENHIRDKESQ KSQFLSSTAT RIFQYETPKS TNYKMDQPQT DFRAHVSDQG RYACDSWNTP RDSSFSVDRY
0401: GLSSAPVERE QYVPKIIDVT YTEGSNDKKW SSREFPWTRK LEVNNKKVFG NHSFRPNQRE IINATMSGSD VFVLMPTGGG KSLTYQLPAL ICGGITLVIS
0501: PLVSLIQDQI MNLLQANIPA ASLSAGMEWA EQLKIFQELN SEHSKYKLLY VTPEKVAKSD SLLRHLENLN SRGLLARFVI DEAHCVSQWG HDFRPDYQSL
0601: GILKQKFPNI PVLALTATAT ASVKEDVVQA LGLVNCVVFR QSFNRPNLWY SVVPKTKKCL EDIDKFIKEN HFDECGIIYC LSRMDCEKVS ERLQEFGHKA
0701: AFYHGSMEPE QRAFIQTQWS KDEINIICAT VAFGMGINKP DVRFVIHHSL PKSIEGYHQE CGRAGRDGQR SSCVLYYGYG DYIRVKHMIS QGGVDQSPMA
0801: TGYNRVASSG RLLETNTENL LRMVRYCENE VECRRFLQLV HLGEKFDSTN CKKTCDNCCS SQSLIDKDVT LITRQLVELV KQTGERFSSA HILEVYRGSL
0901: NQMVKKHRHE TLQFHGAGKH LSKIEVSRIL HYLVTEDILV EDVRKSDMYG SVSSLLQVNN AKATILFSGS QTIVMKFPSS VKVLKPSKQG ATAAKGPLTS
1001: EKQSTLPLTT EDAPPKDVNL SANMYTALRK LRTALVKEAP DGVMAYHIFI NSTLQQISRR IPRTKEELLE INGLGKAKVS KYGDQLLETI ETTVNEYYGT
1101: NKKDSIISND SPDSGKRRRD ENISPNVAED DDFEVSPSQS CKKTVRNKSN EVLHGECIDG DRRGMELDFD FKDEDGSEIR PEGRVLPW
0101: PPIDVGTNDS YSARERSTAK VISSTGGSVY SSTRPNLSAM NVSGTGRSFH SFPSSVPGDD KIVAEKFPRG NNEIRESEPS CTHLNGVEKS FGNSAFPAEQ
0201: FESRKACLDD MDDDDILENI DVDQIVMEHY HSTSTPQPSV SNFSLRTPPV DRSASRLEEE CNLPPELCSN CSHGIKLGLC PEASTHVEQM KDVLLAISNE
0301: LLDDATDLSP DRVGQLRQER LRLKKQIQQL ENHIRDKESQ KSQFLSSTAT RIFQYETPKS TNYKMDQPQT DFRAHVSDQG RYACDSWNTP RDSSFSVDRY
0401: GLSSAPVERE QYVPKIIDVT YTEGSNDKKW SSREFPWTRK LEVNNKKVFG NHSFRPNQRE IINATMSGSD VFVLMPTGGG KSLTYQLPAL ICGGITLVIS
0501: PLVSLIQDQI MNLLQANIPA ASLSAGMEWA EQLKIFQELN SEHSKYKLLY VTPEKVAKSD SLLRHLENLN SRGLLARFVI DEAHCVSQWG HDFRPDYQSL
0601: GILKQKFPNI PVLALTATAT ASVKEDVVQA LGLVNCVVFR QSFNRPNLWY SVVPKTKKCL EDIDKFIKEN HFDECGIIYC LSRMDCEKVS ERLQEFGHKA
0701: AFYHGSMEPE QRAFIQTQWS KDEINIICAT VAFGMGINKP DVRFVIHHSL PKSIEGYHQE CGRAGRDGQR SSCVLYYGYG DYIRVKHMIS QGGVDQSPMA
0801: TGYNRVASSG RLLETNTENL LRMVRYCENE VECRRFLQLV HLGEKFDSTN CKKTCDNCCS SQSLIDKDVT LITRQLVELV KQTGERFSSA HILEVYRGSL
0901: NQMVKKHRHE TLQFHGAGKH LSKIEVSRIL HYLVTEDILV EDVRKSDMYG SVSSLLQVNN AKATILFSGS QTIVMKFPSS VKVLKPSKQG ATAAKGPLTS
1001: EKQSTLPLTT EDAPPKDVNL SANMYTALRK LRTALVKEAP DGVMAYHIFI NSTLQQISRR IPRTKEELLE INGLGKAKVS KYGDQLLETI ETTVNEYYGT
1101: NKKDSIISND SPDSGKRRRD ENISPNVAED DDFEVSPSQS CKKTVRNKSN EVLHGECIDG DRRGMELDFD FKDEDGSEIR PEGRVLPW
Arabidopsis Description
RECQL4AATP-dependent DNA helicase Q-like 4A [Source:UniProtKB/Swiss-Prot;Acc:Q8L840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.