Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98073 | Soybean | nucleus | 94.6 | 89.57 |
| VIT_06s0004g08420.t01 | Wine grape | nucleus | 44.89 | 71.61 |
| HORVU0Hr1G002110.1 | Barley | vacuole | 10.79 | 69.63 |
| Solyc09g018710.2.1 | Tomato | cytosol | 31.57 | 67.07 |
| Os07t0681600-01 | Rice | nucleus | 53.5 | 52.6 |
| TraesCS2D01G102800.1 | Wheat | nucleus | 53.5 | 52.18 |
| TraesCS2A01G103300.1 | Wheat | nucleus | 53.5 | 52.18 |
| TraesCS2B01G120600.1 | Wheat | nucleus | 53.27 | 51.96 |
| EER97745 | Sorghum | nucleus | 53.73 | 51.94 |
| GSMUA_Achr10P... | Banana | nucleus | 51.44 | 48.12 |
| KRH39703 | Soybean | nucleus | 23.54 | 29.5 |
| KRH42322 | Soybean | cytosol, nucleus, plastid | 4.94 | 28.48 |
| KRH00028 | Soybean | cytosol | 2.41 | 28.0 |
| KRH37506 | Soybean | nucleus | 21.24 | 24.87 |
| KRH33841 | Soybean | nucleus | 16.65 | 23.77 |
| KRG92892 | Soybean | nucleus | 20.21 | 20.61 |
| KRH42323 | Soybean | cytosol | 6.54 | 17.7 |
| KRH26366 | Soybean | nucleus | 22.85 | 17.27 |
| KRH44073 | Soybean | nucleus | 22.96 | 17.24 |
| KRH42637 | Soybean | nucleus | 15.96 | 15.38 |
| KRH58739 | Soybean | cytosol | 2.3 | 11.49 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr11:+:28229379..28250999
Molecular Weight (calculated)
97576.4 Da
IEP (calculated)
7.890
GRAVY (calculated)
-0.299
Length
871 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMETMRSVL KKYFRFSDFR PYQREVIEKI IEKRDCLVVM ATGSGKSLCY QVPPLVVKKT GIVVSPLISL MRDQVMALKQ RGIKAEYLGS AQKDFTVHSK
101: AEHGQFDILF MTPEKACTVP SSFWSNLLKA GISLFAVDEA HCISEWGHDF RVEYKHLDKL REVLLDVPFV GLTATATEKV QYDIIGSLKL NYPFVTIGSV
201: DRTNLFYGVK LLNRGQSFID ELVREISKEV TNGGSTIIYC TTIKDVEQIF KSFAEAGIEA GMYHGQMNGK AREESHRLFV RDELQVMVAT IAFGMGIDKP
301: NIRQVIHYGC PKSLESYYQE SGRCGRDGIA SVCWLYYTRS DFAKGDFYCG EVKSEKQRKA IMESLLAAER YCVLTTCRRK FLLEYFGEKF PADRCGNCDN
401: CKISRKERDM SREAFLLMAC IHSCRGGWGL NMPIDVLRGS RSKKILDVQF DKLPLHGLGK NYPANWWKAL GYQLISQGYL KEILSGIYRT ISVSSKGEQF
501: LASSRPDYKP PLVLTLTAEM LGVEDNGNTK EEFKTLSTSE SEGFSEAEGQ LYQMLLEERL KLARSVGTAP YAICGDQTIK KIALPRPSTK ARLANIDGVN
601: QHLVTKYGDH FLQVIQKLSQ GLNLSLDGEA RVATASLQTN EVRKVSLVTN KSNKLTPAKF EAWKMWHEDG CSIHEIANFP GRSAPIKEQI VAEYLLEAAQ
701: EGLPFDWARF SEMIGLTQEI ISEIQGAISK VGSTDKLKPI KNELPKEITY QHIKTYLTMR NCGISLEAIQ SGSIQTEKDG EPAHNASNLS GPTLETCHVE
801: RHCEDGISAI SSTEKCNLEI NEVPTLPVNG SEVQKLSLTS EGGFTNKRHK VSETKEVNST KLKATESSVV E
101: AEHGQFDILF MTPEKACTVP SSFWSNLLKA GISLFAVDEA HCISEWGHDF RVEYKHLDKL REVLLDVPFV GLTATATEKV QYDIIGSLKL NYPFVTIGSV
201: DRTNLFYGVK LLNRGQSFID ELVREISKEV TNGGSTIIYC TTIKDVEQIF KSFAEAGIEA GMYHGQMNGK AREESHRLFV RDELQVMVAT IAFGMGIDKP
301: NIRQVIHYGC PKSLESYYQE SGRCGRDGIA SVCWLYYTRS DFAKGDFYCG EVKSEKQRKA IMESLLAAER YCVLTTCRRK FLLEYFGEKF PADRCGNCDN
401: CKISRKERDM SREAFLLMAC IHSCRGGWGL NMPIDVLRGS RSKKILDVQF DKLPLHGLGK NYPANWWKAL GYQLISQGYL KEILSGIYRT ISVSSKGEQF
501: LASSRPDYKP PLVLTLTAEM LGVEDNGNTK EEFKTLSTSE SEGFSEAEGQ LYQMLLEERL KLARSVGTAP YAICGDQTIK KIALPRPSTK ARLANIDGVN
601: QHLVTKYGDH FLQVIQKLSQ GLNLSLDGEA RVATASLQTN EVRKVSLVTN KSNKLTPAKF EAWKMWHEDG CSIHEIANFP GRSAPIKEQI VAEYLLEAAQ
701: EGLPFDWARF SEMIGLTQEI ISEIQGAISK VGSTDKLKPI KNELPKEITY QHIKTYLTMR NCGISLEAIQ SGSIQTEKDG EPAHNASNLS GPTLETCHVE
801: RHCEDGISAI SSTEKCNLEI NEVPTLPVNG SEVQKLSLTS EGGFTNKRHK VSETKEVNST KLKATESSVV E
001: MESEAIQEDL QNLDVELKDV QGQISALIEH QDRLYERKSE LKTLLKALAA SGSPVASSGG SSAIENWSET FEWDSRADDV RFNVFGISKY RANQKEIINA
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLS
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLS
Arabidopsis Description
RECQL2RECQ helicase L2 [Source:TAIR;Acc:AT1G31360]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.