Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G002110.1 | Barley | vacuole | 13.1 | 87.41 |
| Os07t0681600-01 | Rice | nucleus | 76.03 | 77.31 |
| TraesCS2A01G103300.1 | Wheat | nucleus | 74.92 | 75.59 |
| TraesCS2B01G120600.1 | Wheat | nucleus | 74.36 | 75.03 |
| TraesCS2D01G102800.1 | Wheat | nucleus | 74.25 | 74.92 |
| Solyc09g018710.2.1 | Tomato | cytosol | 29.86 | 65.61 |
| VIT_06s0004g08420.t01 | Wine grape | nucleus | 37.85 | 62.45 |
| KRG98073 | Soybean | nucleus | 55.05 | 53.91 |
| KRH30702 | Soybean | nucleus | 51.94 | 53.73 |
| GSMUA_Achr10P... | Banana | nucleus | 53.94 | 52.2 |
| KXG38755 | Sorghum | nucleus | 22.09 | 28.03 |
| OQU81827 | Sorghum | cytosol, extracellular | 5.55 | 27.93 |
| KXG31219 | Sorghum | nucleus | 21.53 | 25.8 |
| EES10228 | Sorghum | nucleus | 17.43 | 25.16 |
| EES19033 | Sorghum | nucleus | 20.42 | 21.3 |
| EES06253 | Sorghum | nucleus | 22.86 | 17.24 |
| EES12342 | Sorghum | plastid | 16.76 | 15.63 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr2:+:76726271..76735708
Molecular Weight (calculated)
99802.4 Da
IEP (calculated)
7.041
GRAVY (calculated)
-0.272
Length
901 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAALKGYFG YSTFRPYQRE IIQKVLDGRD CLAVMATGSG KSICYQIPPL VTKKTAVVVS PLLSLMQDQV MSLKQKGVKS EYLGSTQMNS SVSNEAEKGA
101: FDVLYMTPEK AISLPSRFWS NLQAAGICLL AVDEAHCISE WGHDFRIEYK QLHSLRDLLV DVPFVALTAT ATERVRQDIS TSLVLRSPHV VVGSFDRHNL
201: FYGVKTCNRS MSFVSELVKD VSKKSAAGES TIIYCTTIRD TEQVHEALVT SGIKAGIYHG QMGSRAREES HRSFIRDEVL VMVATIAFGM GIDKPDVRCV
301: IHYGCPKSLE SYYQESGRCG RDGLPSICWL YYQRSDFTKA DFYCSEAKNG TQRKAIMDSF MAAQKYCLLA TCRRRFLLQY FGEERNTDCG NCDNCTAVKN
401: ERDLSKEAFL LLSCIKSCGG RWGLNLPIDV LRGSRAKKIV DKNYDKLQMH GRGKDYSSNW WKALGGLLIA YDYLKETVHD TFRFVSVSPK GVKFLSTADK
501: MDGAPLVFQL TAEMIELEEH GSSHHKEGGG LNPVPTLEAE KFSEDESKLY QMLLNVRMKL AQDIGTAPYA ICGDQTIRNF AKMRPSTGAR LANIDGVNQH
601: FISRFSNIFI QNIAQLSKEL NLPLDNSPLP APPTNPAVEN IAGLPKPLQN NLPGILGDAK LTAWELWHKQ EYSFLKIAYF RRAVPIKEQT VIAYILDAAR
701: EGCEMDWSRF CREVGLTPDI ATAIRLAISK VGSHDKLKPI KEELPENVTY EMIKTFLTIE GHGLSEQVFG SGTADGVPSR RAEPPISSSH ASEAGRDDMG
801: DGVPAAEASD ANPSAKRGQN VSAEEPATKL QRIDEHGAES TGTATATEES VLALVASCNG VSLEDVAKHF KGSKRESVLE ILEGLESEFT IYKKNGNYMI
901: L
101: FDVLYMTPEK AISLPSRFWS NLQAAGICLL AVDEAHCISE WGHDFRIEYK QLHSLRDLLV DVPFVALTAT ATERVRQDIS TSLVLRSPHV VVGSFDRHNL
201: FYGVKTCNRS MSFVSELVKD VSKKSAAGES TIIYCTTIRD TEQVHEALVT SGIKAGIYHG QMGSRAREES HRSFIRDEVL VMVATIAFGM GIDKPDVRCV
301: IHYGCPKSLE SYYQESGRCG RDGLPSICWL YYQRSDFTKA DFYCSEAKNG TQRKAIMDSF MAAQKYCLLA TCRRRFLLQY FGEERNTDCG NCDNCTAVKN
401: ERDLSKEAFL LLSCIKSCGG RWGLNLPIDV LRGSRAKKIV DKNYDKLQMH GRGKDYSSNW WKALGGLLIA YDYLKETVHD TFRFVSVSPK GVKFLSTADK
501: MDGAPLVFQL TAEMIELEEH GSSHHKEGGG LNPVPTLEAE KFSEDESKLY QMLLNVRMKL AQDIGTAPYA ICGDQTIRNF AKMRPSTGAR LANIDGVNQH
601: FISRFSNIFI QNIAQLSKEL NLPLDNSPLP APPTNPAVEN IAGLPKPLQN NLPGILGDAK LTAWELWHKQ EYSFLKIAYF RRAVPIKEQT VIAYILDAAR
701: EGCEMDWSRF CREVGLTPDI ATAIRLAISK VGSHDKLKPI KEELPENVTY EMIKTFLTIE GHGLSEQVFG SGTADGVPSR RAEPPISSSH ASEAGRDDMG
801: DGVPAAEASD ANPSAKRGQN VSAEEPATKL QRIDEHGAES TGTATATEES VLALVASCNG VSLEDVAKHF KGSKRESVLE ILEGLESEFT IYKKNGNYMI
901: L
001: MESEAIQEDL QNLDVELKDV QGQISALIEH QDRLYERKSE LKTLLKALAA SGSPVASSGG SSAIENWSET FEWDSRADDV RFNVFGISKY RANQKEIINA
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLS
101: IMTGRDVLVI MAAGGGKSLC YQLPAMLRGG TTLVVSPLLS LIQDQVMGLA ALGISAYMLT STSGKENEKF VYKALEKGED DLKILYVTPE KVSKSKRFMS
201: KLEKCHNAGR LSLISIDEAH CCSQWGHDFR PDYKNLSILK TQFPKVPMVA LTATATQKVQ NDLIEMLHIP KCVKFVSSVN RPNLFYSVRE KSAVGKLVVD
301: EIAEFIRESY SNNESGIVYC FSRKECEQIA GDLRERGISA DYYHADMDAN MREKVHMRWS KNKLQVIVGT VAFGMGINKP DVRFVIHHSL SKSMETYYQE
401: SGRAGRDGLP SECILFFRSA DVPRQSSMVF YEYSGLQNLY DIVRYCQSKT KCRRSAFFRH FGEPSQDCNG MCDNCALSSE VKEVDVSDLS KLVVSMVQET
501: QAKDQRVTML QLGDKLRNKH KDLS
Arabidopsis Description
RECQL2RECQ helicase L2 [Source:TAIR;Acc:AT1G31360]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.