Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G112800.1 | Wheat | mitochondrion | 96.68 | 95.62 |
| CDY72046 | Canola | cytosol | 17.69 | 72.26 |
| EES00166 | Sorghum | mitochondrion | 69.04 | 71.41 |
| Bra038370.1-P | Field mustard | cytosol | 40.44 | 70.91 |
| Os01t0184500-01 | Rice | mitochondrion | 68.72 | 69.6 |
| GSMUA_Achr9P28700_001 | Banana | nucleus | 53.24 | 69.06 |
| VIT_18s0001g02530.t01 | Wine grape | plastid | 60.98 | 60.79 |
| PGSC0003DMT400059671 | Potato | mitochondrion, plastid, vacuole | 59.4 | 58.93 |
| Solyc12g056740.1.1 | Tomato | nucleus | 58.77 | 58.49 |
| Bra000690.1-P | Field mustard | plastid | 56.71 | 57.9 |
| AT4G09730.1 | Thale cress | mitochondrion, plastid | 56.71 | 57.81 |
| KRH70245 | Soybean | nucleus | 57.98 | 57.7 |
| TraesCS5B01G199500.1 | Wheat | mitochondrion | 19.91 | 22.14 |
| TraesCS3B01G568500.1 | Wheat | mitochondrion | 21.96 | 21.55 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR014014 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51195 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF247 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS3B01G131400 | EnsemblPlants:TraesCS3B01G131400.1 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:-:113515026..113520446
Molecular Weight (calculated)
69041.0 Da
IEP (calculated)
10.829
GRAVY (calculated)
-0.550
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAAAGRCL LLSRPSPLRL RVLRAALSTA VPPSSPALAA PAPPPRHELL LERLRLRHLK DSSSPGPPKP LRERARSGER GSPQQQQRSV EVESFEELGL
101: EEEVLAAMRE AGITKPTEIQ CVGVPAVLSG TSVVLGSHTG SGKTLAYLLP LVQLLRHDEV TLGMSMKPRR PRAVVLCPTR ELTEQVFRVA KSISHHARFR
201: STMVSGGTRL KPQEDSLNMP VDMVVGTPGR ILDHIKEGNI VYGDIKYLVL DEADTMFDQG FGEDIRKFLA PLKNRASKPG DQGFQTILVS ATMTKGVQKL
301: IDEEFEGIEH LRTSTFQKRI ATARHDFIKL SGSENKLEAL LQVLEPSLAK GNKVMVFCNT LNSSRAVDHF LTENHISTVN YHGEVPAEER VENLNKFRNE
401: EGDCPTLVCT DLAARGLDLE VDHVIMFDFP KNSIDYLHRT GRTARMGAKG KVTSLIAKKD VGLATRIEDA MKKNESLESL TTSNVRRDSA NSQNPSTKGR
501: TSARSARSSD APRVASQKGN KRGVTLSRRP PKVAIKDTTS TRKRSSTKSQ PSSSRKHSPS KNPPKARPAE ARKAKPVRAG SSKGGEKVGK SSRTRPEGGK
601: GDALNKVGSK LSVVGFRGRS TAKSAQAYHG NRS
101: EEEVLAAMRE AGITKPTEIQ CVGVPAVLSG TSVVLGSHTG SGKTLAYLLP LVQLLRHDEV TLGMSMKPRR PRAVVLCPTR ELTEQVFRVA KSISHHARFR
201: STMVSGGTRL KPQEDSLNMP VDMVVGTPGR ILDHIKEGNI VYGDIKYLVL DEADTMFDQG FGEDIRKFLA PLKNRASKPG DQGFQTILVS ATMTKGVQKL
301: IDEEFEGIEH LRTSTFQKRI ATARHDFIKL SGSENKLEAL LQVLEPSLAK GNKVMVFCNT LNSSRAVDHF LTENHISTVN YHGEVPAEER VENLNKFRNE
401: EGDCPTLVCT DLAARGLDLE VDHVIMFDFP KNSIDYLHRT GRTARMGAKG KVTSLIAKKD VGLATRIEDA MKKNESLESL TTSNVRRDSA NSQNPSTKGR
501: TSARSARSSD APRVASQKGN KRGVTLSRRP PKVAIKDTTS TRKRSSTKSQ PSSSRKHSPS KNPPKARPAE ARKAKPVRAG SSKGGEKVGK SSRTRPEGGK
601: GDALNKVGSK LSVVGFRGRS TAKSAQAYHG NRS
001: MVGASRTILS LSLSSSLFTF SKIPHVFPFL RLHKPRFHHA FRPLYSAAAT TSSPTTETNV TDPDQLKHTI LLERLRLRHL KESAKPPQQR PSSVVGVEEE
101: SSIRKKSKKL VENFQELGLS EEVMGALQEL NIEVPTEIQC IGIPAVMERK SVVLGSHTGS GKTLAYLLPI VQLMREDEAN LGKKTKPRRP RTVVLCPTRE
201: LSEQVYRVAK SISHHARFRS ILVSGGSRIR PQEDSLNNAI DMVVGTPGRI LQHIEEGNMV YGDIAYLVLD EADTMFDRGF GPEIRKFLAP LNQRALKTND
301: QGFQTVLVTA TMTMAVQKLV DEEFQGIEHL RTSTLHKKIA NARHDFIKLS GGEDKLEALL QVLEPSLAKG SKVMVFCNTL NSSRAVDHYL SENQISTVNY
401: HGEVPAEQRV ENLKKFKDEE GDCPTLVCTD LAARGLDLDV DHVVMFDFPK NSIDYLHRTG RTARMGAKGK VTSLVSRKDQ MLAARIEEAM RNNESLESLT
501: TDNVRRDAAR THITQEKGRS VKQIREVSKQ RNSRDKPSSS SPPARSTGGK TPVRKSSSSS FSKPRKASSP PEKSSKPKRK ILKTVGSRSI AARGKTGSDR
601: RPGKKLSVVG FRGKSSSARA S
101: SSIRKKSKKL VENFQELGLS EEVMGALQEL NIEVPTEIQC IGIPAVMERK SVVLGSHTGS GKTLAYLLPI VQLMREDEAN LGKKTKPRRP RTVVLCPTRE
201: LSEQVYRVAK SISHHARFRS ILVSGGSRIR PQEDSLNNAI DMVVGTPGRI LQHIEEGNMV YGDIAYLVLD EADTMFDRGF GPEIRKFLAP LNQRALKTND
301: QGFQTVLVTA TMTMAVQKLV DEEFQGIEHL RTSTLHKKIA NARHDFIKLS GGEDKLEALL QVLEPSLAKG SKVMVFCNTL NSSRAVDHYL SENQISTVNY
401: HGEVPAEQRV ENLKKFKDEE GDCPTLVCTD LAARGLDLDV DHVVMFDFPK NSIDYLHRTG RTARMGAKGK VTSLVSRKDQ MLAARIEEAM RNNESLESLT
501: TDNVRRDAAR THITQEKGRS VKQIREVSKQ RNSRDKPSSS SPPARSTGGK TPVRKSSSSS FSKPRKASSP PEKSSKPKRK ILKTVGSRSI AARGKTGSDR
601: RPGKKLSVVG FRGKSSSARA S
Arabidopsis Description
RH39RH39 [Source:UniProtKB/TrEMBL;Acc:A0A178V449]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.