Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G131400.1 | Wheat | mitochondrion | 95.62 | 96.68 |
| CDY72046 | Canola | cytosol | 17.66 | 72.9 |
| EES00166 | Sorghum | mitochondrion | 69.38 | 72.55 |
| Bra038370.1-P | Field mustard | cytosol | 40.0 | 70.91 |
| Os01t0184500-01 | Rice | mitochondrion | 68.59 | 70.24 |
| GSMUA_Achr9P28700_001 | Banana | nucleus | 52.81 | 69.26 |
| VIT_18s0001g02530.t01 | Wine grape | plastid | 60.16 | 60.63 |
| PGSC0003DMT400059671 | Potato | mitochondrion, plastid, vacuole | 58.44 | 58.62 |
| KRH70245 | Soybean | nucleus | 57.81 | 58.18 |
| Solyc12g056740.1.1 | Tomato | nucleus | 57.81 | 58.18 |
| AT4G09730.1 | Thale cress | mitochondrion, plastid | 56.09 | 57.81 |
| Bra000690.1-P | Field mustard | plastid | 55.94 | 57.74 |
| TraesCS5A01G200900.1 | Wheat | mitochondrion | 19.84 | 21.06 |
| TraesCS5A01G548800.2 | Wheat | mitochondrion, plastid | 21.25 | 20.67 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR014014 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51195 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF247 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS3A01G112800 | EnsemblPlants:TraesCS3A01G112800.1 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:+:80218604..80225147
Molecular Weight (calculated)
69524.4 Da
IEP (calculated)
10.887
GRAVY (calculated)
-0.565
Length
640 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAAAGRCL LLSRPSPLRL RVLRAALSTA VPPSSPALAA PAPPPRHELL LERLRLRHLK DSSPPGPPKP LRERARGGER GSPQQQQQRS VEVESFEELG
101: LEEEVLAAMR EAGITKPTEI QCVGVPAVLS GTSVVLGSHT GSGKTLAYLL PLVQLLRHDE ATLGMSMKPR RPRAVVLCPT RELTEQVFRV AKSISHHARF
201: RSTMVSGGTR LKPQEDSLNM PVDMVVGTPG RILDHIKEGN IVYGDIKYLV LDEADTMFDQ GFGEDIRKFL APLKNRASKP GDQGFQTILV SATMTKGVQK
301: LIDEEFEGIE HLRTSTFQKR IATARHDFIK LSGSENKLEA LLQVLEPSLA KGNKVMVFCN TLNSSRAVDH FLTENHISTV NYHGEVPAEE RVENLNKFRN
401: EEGDCPTLVC TDLAARGLDL EVDHVIMFDF PKNSIDYLHR TGRTARMGAK GKVTSLVAKK DVGLATRIED AMKKNESLES LTTSNVRRDS ANSQNPSTKG
501: RTSARSARSS DAPRGRSARS SDAPRVASQK GNKRGVTLSR RSPKVAVKDT TSTRKRSSTK SQPSSSRKHS PSKNPPKARP AEARKAKPVR AGSSKGGEKA
601: GKSSRARPEG GKGDALNKVG SKLSVVGFRG RSTGKSAQAS
101: LEEEVLAAMR EAGITKPTEI QCVGVPAVLS GTSVVLGSHT GSGKTLAYLL PLVQLLRHDE ATLGMSMKPR RPRAVVLCPT RELTEQVFRV AKSISHHARF
201: RSTMVSGGTR LKPQEDSLNM PVDMVVGTPG RILDHIKEGN IVYGDIKYLV LDEADTMFDQ GFGEDIRKFL APLKNRASKP GDQGFQTILV SATMTKGVQK
301: LIDEEFEGIE HLRTSTFQKR IATARHDFIK LSGSENKLEA LLQVLEPSLA KGNKVMVFCN TLNSSRAVDH FLTENHISTV NYHGEVPAEE RVENLNKFRN
401: EEGDCPTLVC TDLAARGLDL EVDHVIMFDF PKNSIDYLHR TGRTARMGAK GKVTSLVAKK DVGLATRIED AMKKNESLES LTTSNVRRDS ANSQNPSTKG
501: RTSARSARSS DAPRGRSARS SDAPRVASQK GNKRGVTLSR RSPKVAVKDT TSTRKRSSTK SQPSSSRKHS PSKNPPKARP AEARKAKPVR AGSSKGGEKA
601: GKSSRARPEG GKGDALNKVG SKLSVVGFRG RSTGKSAQAS
001: MVGASRTILS LSLSSSLFTF SKIPHVFPFL RLHKPRFHHA FRPLYSAAAT TSSPTTETNV TDPDQLKHTI LLERLRLRHL KESAKPPQQR PSSVVGVEEE
101: SSIRKKSKKL VENFQELGLS EEVMGALQEL NIEVPTEIQC IGIPAVMERK SVVLGSHTGS GKTLAYLLPI VQLMREDEAN LGKKTKPRRP RTVVLCPTRE
201: LSEQVYRVAK SISHHARFRS ILVSGGSRIR PQEDSLNNAI DMVVGTPGRI LQHIEEGNMV YGDIAYLVLD EADTMFDRGF GPEIRKFLAP LNQRALKTND
301: QGFQTVLVTA TMTMAVQKLV DEEFQGIEHL RTSTLHKKIA NARHDFIKLS GGEDKLEALL QVLEPSLAKG SKVMVFCNTL NSSRAVDHYL SENQISTVNY
401: HGEVPAEQRV ENLKKFKDEE GDCPTLVCTD LAARGLDLDV DHVVMFDFPK NSIDYLHRTG RTARMGAKGK VTSLVSRKDQ MLAARIEEAM RNNESLESLT
501: TDNVRRDAAR THITQEKGRS VKQIREVSKQ RNSRDKPSSS SPPARSTGGK TPVRKSSSSS FSKPRKASSP PEKSSKPKRK ILKTVGSRSI AARGKTGSDR
601: RPGKKLSVVG FRGKSSSARA S
101: SSIRKKSKKL VENFQELGLS EEVMGALQEL NIEVPTEIQC IGIPAVMERK SVVLGSHTGS GKTLAYLLPI VQLMREDEAN LGKKTKPRRP RTVVLCPTRE
201: LSEQVYRVAK SISHHARFRS ILVSGGSRIR PQEDSLNNAI DMVVGTPGRI LQHIEEGNMV YGDIAYLVLD EADTMFDRGF GPEIRKFLAP LNQRALKTND
301: QGFQTVLVTA TMTMAVQKLV DEEFQGIEHL RTSTLHKKIA NARHDFIKLS GGEDKLEALL QVLEPSLAKG SKVMVFCNTL NSSRAVDHYL SENQISTVNY
401: HGEVPAEQRV ENLKKFKDEE GDCPTLVCTD LAARGLDLDV DHVVMFDFPK NSIDYLHRTG RTARMGAKGK VTSLVSRKDQ MLAARIEEAM RNNESLESLT
501: TDNVRRDAAR THITQEKGRS VKQIREVSKQ RNSRDKPSSS SPPARSTGGK TPVRKSSSSS FSKPRKASSP PEKSSKPKRK ILKTVGSRSI AARGKTGSDR
601: RPGKKLSVVG FRGKSSSARA S
Arabidopsis Description
RH39RH39 [Source:UniProtKB/TrEMBL;Acc:A0A178V449]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.