Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G143900.1 | Wheat | plasma membrane | 97.58 | 97.58 |
| TraesCS3D01G152300.1 | Wheat | plasma membrane | 97.58 | 97.58 |
| EES02242 | Sorghum | cytosol, peroxisome, plasma membrane | 83.64 | 83.13 |
| Os01t0219100-01 | Rice | cytosol, peroxisome, plasma membrane | 80.61 | 80.12 |
| Bra009740.1-P | Field mustard | plasma membrane | 64.85 | 65.64 |
| CDX88083 | Canola | plasma membrane | 64.85 | 65.64 |
| CDX80421 | Canola | plasma membrane | 64.24 | 65.03 |
| KRG94152 | Soybean | cytosol, plasma membrane, plastid | 63.03 | 64.6 |
| Solyc03g117000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 61.82 | 63.75 |
| GSMUA_Achr7P14100_001 | Banana | cytosol | 62.42 | 63.19 |
| VIT_16s0098g00310.t01 | Wine grape | cytosol | 61.21 | 63.12 |
| AT5G24170.1 | Thale cress | plasma membrane | 61.21 | 61.96 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 61.21 | 61.59 |
| PGSC0003DMT400036613 | Potato | cytosol, nucleus, plasma membrane | 36.36 | 55.56 |
| CDY29688 | Canola | extracellular, plasma membrane, vacuole | 38.18 | 48.46 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G170500.1 | EnsemblPlantsGene:TraesCS3B01G170500 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016192 | InterPro:Vesicle_transpt_Got1/SFT2 | InterPro:Vesicle_transpt_SFT2 | PANTHER:PTHR23137 | PANTHER:PTHR23137:SF14 |
| PFAM:PF04178 | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3B:+:171589619..171592975
Molecular Weight (calculated)
18371.1 Da
IEP (calculated)
4.831
GRAVY (calculated)
0.876
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALTRFHRS VAGGDDEEWQ EDDILGDTEG LCSLSPLQRL YAFAACLVAG LALMMLSLIV FARPIKFALL FTFGNIMAVG STVFIMGVNK QLRMMLDPVR
101: VYATAIYVGC AVFALIFALL IHDKLLTLIA IICEICALFW YSLSYIPFAR RIVSDLMVKL CDTEL
101: VYATAIYVGC AVFALIFALL IHDKLLTLIA IICEICALFW YSLSYIPFAR RIVSDLMVKL CDTEL
001: MQKLNDIFSG GGDGDGTTDS FLEDGSEGLC ALSTTQRMYG FAASLATGLL LMFLSMIVFG IPIKFALLFT FGNVLAIGST AFLMGPEQQM SMMFDPVRFL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:Q6GKX4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.