Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400036613 | Potato | cytosol, nucleus, plasma membrane | 60.62 | 89.81 |
| VIT_16s0098g00310.t01 | Wine grape | cytosol | 67.5 | 67.5 |
| Bra009740.1-P | Field mustard | plasma membrane | 68.75 | 67.48 |
| CDX88083 | Canola | plasma membrane | 68.75 | 67.48 |
| CDX80421 | Canola | plasma membrane | 68.12 | 66.87 |
| AT5G24170.1 | Thale cress | plasma membrane | 67.5 | 66.26 |
| KRG94152 | Soybean | cytosol, plasma membrane, plastid | 65.62 | 65.22 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 66.25 | 64.63 |
| Os01t0219100-01 | Rice | cytosol, peroxisome, plasma membrane | 66.25 | 63.86 |
| EES02242 | Sorghum | cytosol, peroxisome, plasma membrane | 65.62 | 63.25 |
| TraesCS3D01G152300.1 | Wheat | plasma membrane | 65.0 | 63.03 |
| TraesCS3A01G143900.1 | Wheat | plasma membrane | 63.75 | 61.82 |
| TraesCS3B01G170500.1 | Wheat | plasma membrane | 63.75 | 61.82 |
| Solyc04g047690.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 26.88 | 59.72 |
| GSMUA_Achr7P14100_001 | Banana | cytosol | 60.62 | 59.51 |
| CDY29688 | Canola | extracellular, plasma membrane, vacuole | 41.88 | 51.54 |
| Solyc04g047670.2.1 | Tomato | cytosol | 21.88 | 30.97 |
Protein Annotations
| EnsemblPlants:Solyc03g117000.2.1 | EnsemblPlantsGene:Solyc03g117000.2 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Vesicle_transpt_Got1/SFT2 | InterPro:Vesicle_transpt_SFT2 | PANTHER:PTHR23137 |
| PANTHER:PTHR23137:SF14 | PFAM:PF04178 | TMHMM:TMhelix | UniParc:UPI00027674CF | UniProt:K4BLK2 | MapMan:35.2 |
Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:K4BLK2]
Coordinates
chr3:+:66261396..66269770
Molecular Weight (calculated)
17974.7 Da
IEP (calculated)
5.035
GRAVY (calculated)
0.878
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLSESILG ENEEQQDNLF GDQEALCSVS PLQRVYGFAA CLLAGFICMF LSMIVFIKPI KFALLFTFGN MLAIGSTAFL IGPMQQLSMM MDPVRAYATS
101: MYVGCVVLAL ICALWIHSKI LTLLAIICEI CALVWYSLSY IPFARRMVSN VTIRLFDTEI
101: MYVGCVVLAL ICALWIHSKI LTLLAIICEI CALVWYSLSY IPFARRMVSN VTIRLFDTEI
001: MQKLNDIFSG GGDGDGTTDS FLEDGSEGLC ALSTTQRMYG FAASLATGLL LMFLSMIVFG IPIKFALLFT FGNVLAIGST AFLMGPEQQM SMMFDPVRFL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:Q6GKX4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.