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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES02242 Sorghum cytosol, peroxisome, plasma membrane 86.14 86.14
TraesCS3A01G143900.1 Wheat plasma membrane 81.33 81.82
TraesCS3D01G152300.1 Wheat plasma membrane 80.72 81.21
TraesCS3B01G170500.1 Wheat plasma membrane 80.12 80.61
GSMUA_Achr10P... Banana cytosol, plasma membrane, plastid 68.67 69.51
VIT_16s0098g00310.t01 Wine grape cytosol 66.87 69.38
Bra009740.1-P Field mustard plasma membrane 66.87 68.1
CDX80421 Canola plasma membrane 66.87 68.1
CDX88083 Canola plasma membrane 66.87 68.1
KRG94152 Soybean cytosol, plasma membrane, plastid 65.66 67.7
GSMUA_Achr7P14100_001 Banana cytosol 66.27 67.48
Solyc03g117000.2.1 Tomato cytosol, nucleus, plasma membrane 63.86 66.25
AT5G24170.1 Thale cress plasma membrane 62.65 63.8
PGSC0003DMT400036613 Potato cytosol, nucleus, plasma membrane 35.54 54.63
CDY29688 Canola extracellular, plasma membrane, vacuole 40.96 52.31
Os02t0564500-01 Rice cytosol 53.61 52.05
Protein Annotations
MapMan:35.2EntrezGene:4324638EMBL:AK241253UniProt:B7F8P3ProteinID:BAF04331.2ProteinID:BAS71059.1
ProteinID:EEE54126.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015031GO:GO:0016020
GO:GO:0016021GO:GO:0016192EnsemblPlantsGene:Os01g0219100EnsemblPlants:Os01t0219100-01PFAM:PF04178PANTHER:PTHR23137
PANTHER:PTHR23137:SF14TMHMM:TMhelixUniParc:UPI000188AF5FInterPro:Vesicle_transpt_Got1/SFT2InterPro:Vesicle_transpt_SFT2RefSeq:XP_015629114.1
Description
SFT2-like family protein. (Os01t0219100-01)
Coordinates
chr1:+:6525486..6528178
Molecular Weight (calculated)
18290.9 Da
IEP (calculated)
4.806
GRAVY (calculated)
0.849
Length
166 amino acids
Sequence
(BLAST)
001: MDALTRLHRA LAGGDDDEEQ PEDSILGDTE GICSLSPVQR VYGFAACLVA GLALMILSLV VFVRPIKFAV MFTFGNILAV GSTAFLIGPS QQLRMMLDPV
101: RVYATAIYGG FVFLALIFAL WIHSKVLTLI AIICEICALF WYSLSYIPFA RRMVSDLMVK LCDTEL
Best Arabidopsis Sequence Match ( AT5G24170.1 )
(BLAST)
001: MQKLNDIFSG GGDGDGTTDS FLEDGSEGLC ALSTTQRMYG FAASLATGLL LMFLSMIVFG IPIKFALLFT FGNVLAIGST AFLMGPEQQM SMMFDPVRFL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:Q6GKX4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.