Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07001 | Sorghum | cytosol | 90.64 | 89.08 |
| TraesCS6D01G182100.1 | Wheat | plasma membrane | 88.3 | 86.78 |
| TraesCS6A01G193700.1 | Wheat | cytosol, peroxisome, plasma membrane | 86.55 | 85.06 |
| CDX87166 | Canola | extracellular | 50.29 | 78.9 |
| Bra009694.1-P | Field mustard | plasma membrane | 75.44 | 73.71 |
| CDX80373 | Canola | plasma membrane | 75.44 | 73.71 |
| CDX88036 | Canola | plasma membrane | 75.44 | 73.71 |
| CDY59031 | Canola | plasma membrane | 75.44 | 73.71 |
| AT5G23550.1 | Thale cress | cytosol, plasma membrane, vacuole | 74.85 | 73.14 |
| VIT_07s0130g00230.t01 | Wine grape | cytosol | 75.44 | 72.88 |
| CDY16858 | Canola | cytosol | 74.27 | 71.35 |
| KRH09272 | Soybean | cytosol | 73.1 | 70.22 |
| KRH38773 | Soybean | cytosol | 72.51 | 69.66 |
| GSMUA_Achr6P12660_001 | Banana | cytosol, peroxisome, plasma membrane | 78.95 | 67.84 |
| Zm00001d050823_P002 | Maize | cytosol | 69.01 | 65.19 |
| HORVU6Hr1G048290.1 | Barley | cytosol, plasma membrane | 88.89 | 58.91 |
| Solyc04g047670.2.1 | Tomato | cytosol | 35.67 | 53.98 |
| Os01t0219100-01 | Rice | cytosol, peroxisome, plasma membrane | 52.05 | 53.61 |
| Bra026491.1-P | Field mustard | mitochondrion | 64.33 | 52.13 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4329697 | EMBL:AK103450 | ProteinID:BAD15819.1 | ProteinID:BAF09075.1 | ProteinID:BAS79290.1 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016192 | EnsemblPlantsGene:Os02g0564500 | EnsemblPlants:Os02t0564500-01 | PFAM:PF04178 | PANTHER:PTHR23137 | PANTHER:PTHR23137:SF14 |
| UniProt:Q6Z7E9 | TMHMM:TMhelix | UniParc:UPI0000358B94 | InterPro:Vesicle_transpt_Got1/SFT2 | InterPro:Vesicle_transpt_SFT2 | RefSeq:XP_015623461.1 |
Description
SFT2-like family protein. (Os02t0564500-01)
Coordinates
chr2:-:21432254..21434982
Molecular Weight (calculated)
19017.5 Da
IEP (calculated)
4.836
GRAVY (calculated)
0.720
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTMRGALER ARMLVGMEVD EESAPEEQSF FDDVTRNCAL TTTQRLYGFA ICLAAGLTCT FLSMLVFFNP VKFGVTFTLG NLMALGSTAF LIGPKRQFDM
101: MLDSVRIYAT AVYIASIIIA LFCALFVHSK LLTLLAIILE FGALVWYSLS YIPFARSVVS KVMTSCFDTE F
101: MLDSVRIYAT AVYIASIIIA LFCALFVHSK LLTLLAIILE FGALVWYSLS YIPFARSVVS KVMTSCFDTE F
001: MDKMNQAIEK MKMLVGMEVE DEQQAADEES SLSFMEDLNR NCALTTKQRF YGFAICLSAG LTCTLLSMLV FFNPVKFGIT FTLGNLMALG STAFLIGPQR
101: QVTMMLDPAR IYATALYLAS IIIALFCALY VRNKLLTLLA IILEFTGLIW YSLSYIPFAR TMVSKIFMTC FDTEF
101: QVTMMLDPAR IYATALYLAS IIIALFCALY VRNKLLTLLA IILEFTGLIW YSLSYIPFAR TMVSKIFMTC FDTEF
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:Q9LT07]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.