Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G182100.1 | Wheat | plasma membrane | 91.95 | 91.95 |
| Os02t0564500-01 | Rice | cytosol | 89.08 | 90.64 |
| TraesCS6A01G193700.1 | Wheat | cytosol, peroxisome, plasma membrane | 90.23 | 90.23 |
| CDX87166 | Canola | extracellular | 48.28 | 77.06 |
| VIT_07s0130g00230.t01 | Wine grape | cytosol | 75.86 | 74.58 |
| Zm00001d050823_P002 | Maize | cytosol | 75.86 | 72.93 |
| Bra009694.1-P | Field mustard | plasma membrane | 72.41 | 72.0 |
| CDY59031 | Canola | plasma membrane | 72.41 | 72.0 |
| CDX88036 | Canola | plasma membrane | 72.41 | 72.0 |
| CDX80373 | Canola | plasma membrane | 72.41 | 72.0 |
| AT5G23550.1 | Thale cress | cytosol, plasma membrane, vacuole | 72.41 | 72.0 |
| CDY16858 | Canola | cytosol | 72.99 | 71.35 |
| KRH09272 | Soybean | cytosol | 72.41 | 70.79 |
| KRH38773 | Soybean | cytosol | 71.84 | 70.22 |
| GSMUA_Achr6P12660_001 | Banana | cytosol, peroxisome, plasma membrane | 76.44 | 66.83 |
| HORVU6Hr1G048290.1 | Barley | cytosol, plasma membrane | 91.38 | 61.63 |
| Solyc04g047670.2.1 | Tomato | cytosol | 35.06 | 53.98 |
| EES02242 | Sorghum | cytosol, peroxisome, plasma membrane | 48.28 | 50.6 |
| Bra026491.1-P | Field mustard | mitochondrion | 60.92 | 50.24 |
Protein Annotations
| MapMan:35.2 | EntrezGene:8072596 | UniProt:C5XV04 | EnsemblPlants:EES07001 | ProteinID:EES07001 | ProteinID:EES07001.1 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016192 | PFAM:PF04178 | PANTHER:PTHR23137 | PANTHER:PTHR23137:SF14 | EnsemblPlantsGene:SORBI_3004G184000 | unigene:Sbi.8011 |
| TMHMM:TMhelix | UniParc:UPI0001A85CD9 | InterPro:Vesicle_transpt_Got1/SFT2 | InterPro:Vesicle_transpt_SFT2 | RefSeq:XP_002454025.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:-:53738691..53742655
Molecular Weight (calculated)
19392.0 Da
IEP (calculated)
5.125
GRAVY (calculated)
0.653
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSMRGALER AKMLVGMEVD EESALPPPEE QSFFDDINRH CTLNTTQRLY GFAICLAAGL TCTFLSMIVF FNPVKFGVTF TLGNLMALGS TAFLIGPKRQ
101: FDMMLDSVRI YATAIYIASI IVALFCALYV HSKLLTLLAI ILEFGALVWY SLSYIPFARS IVSKVMTSCF DTDF
101: FDMMLDSVRI YATAIYIASI IVALFCALYV HSKLLTLLAI ILEFGALVWY SLSYIPFARS IVSKVMTSCF DTDF
001: MDKMNQAIEK MKMLVGMEVE DEQQAADEES SLSFMEDLNR NCALTTKQRF YGFAICLSAG LTCTLLSMLV FFNPVKFGIT FTLGNLMALG STAFLIGPQR
101: QVTMMLDPAR IYATALYLAS IIIALFCALY VRNKLLTLLA IILEFTGLIW YSLSYIPFAR TMVSKIFMTC FDTEF
101: QVTMMLDPAR IYATALYLAS IIIALFCALY VRNKLLTLLA IILEFTGLIW YSLSYIPFAR TMVSKIFMTC FDTEF
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:Q9LT07]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.