Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 81.6 | 81.1 |
| Os01t0219100-01 | Rice | cytosol, peroxisome, plasma membrane | 67.48 | 66.27 |
| VIT_16s0098g00310.t01 | Wine grape | cytosol | 63.19 | 64.38 |
| EES02242 | Sorghum | cytosol, peroxisome, plasma membrane | 64.42 | 63.25 |
| TraesCS3D01G152300.1 | Wheat | plasma membrane | 63.8 | 63.03 |
| TraesCS3A01G143900.1 | Wheat | plasma membrane | 63.19 | 62.42 |
| TraesCS3B01G170500.1 | Wheat | plasma membrane | 63.19 | 62.42 |
| KRG94152 | Soybean | cytosol, plasma membrane, plastid | 60.74 | 61.49 |
| Solyc03g117000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 59.51 | 60.62 |
| CDX80421 | Canola | plasma membrane | 57.67 | 57.67 |
| Bra009740.1-P | Field mustard | plasma membrane | 57.06 | 57.06 |
| CDX88083 | Canola | plasma membrane | 57.06 | 57.06 |
| AT5G24170.1 | Thale cress | plasma membrane | 55.83 | 55.83 |
| PGSC0003DMT400036613 | Potato | cytosol, nucleus, plasma membrane | 32.52 | 49.07 |
| CDY29688 | Canola | extracellular, plasma membrane, vacuole | 37.42 | 46.92 |
| GSMUA_Achr6P12660_001 | Banana | cytosol, peroxisome, plasma membrane | 51.53 | 42.21 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P14100_001 | EnsemblPlants:GSMUA_Achr7T14100_001 | EnsemblPlantsGene:GSMUA_Achr7G14100_001 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Vesicle_transpt_Got1/SFT2 | InterPro:Vesicle_transpt_SFT2 |
| PANTHER:PTHR23137 | PANTHER:PTHR23137:SF14 | PFAM:PF04178 | TMHMM:TMhelix | UniParc:UPI000295E50E | UniProt:M0THE7 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative Vesicle transport protein SFT2B [Source:GMGC_GENE;Acc:GSMUA_Achr7G14100_001]
Coordinates
chr7:+:11274618..11277833
Molecular Weight (calculated)
18387.8 Da
IEP (calculated)
5.713
GRAVY (calculated)
0.705
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MERFKWIPQS LHGGDQDREE DLLGEFEGSD SWSPLQRLYG FAASLVIGFA FMLLSLIVFY RPIKFGIMFT FGNILAVGST AFLIGPVQQA RLMLDPVRIY
101: ATAIYVGSAI VALVCALWIH SKMLTLIAII IEICALVWYS LSYVPFARRM VSELFIGCCD REF
101: ATAIYVGSAI VALVCALWIH SKMLTLIAII IEICALVWYS LSYVPFARRM VSELFIGCCD REF
001: MQKLNDIFSG GGDGDGTTDS FLEDGSEGLC ALSTTQRMYG FAASLATGLL LMFLSMIVFG IPIKFALLFT FGNVLAIGST AFLMGPEQQM SMMFDPVRFL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:Q6GKX4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.