Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0098g00310.t01 | Wine grape | cytosol | 71.43 | 71.88 |
| Bra009740.1-P | Field mustard | plasma membrane | 69.57 | 68.71 |
| CDX88083 | Canola | plasma membrane | 69.57 | 68.71 |
| CDX80421 | Canola | plasma membrane | 68.94 | 68.1 |
| Os01t0219100-01 | Rice | cytosol, peroxisome, plasma membrane | 67.7 | 65.66 |
| AT5G24170.1 | Thale cress | plasma membrane | 66.46 | 65.64 |
| Solyc03g117000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 65.22 | 65.62 |
| EES02242 | Sorghum | cytosol, peroxisome, plasma membrane | 65.84 | 63.86 |
| TraesCS3A01G143900.1 | Wheat | plasma membrane | 64.6 | 63.03 |
| TraesCS3B01G170500.1 | Wheat | plasma membrane | 64.6 | 63.03 |
| TraesCS3D01G152300.1 | Wheat | plasma membrane | 64.6 | 63.03 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 63.35 | 62.2 |
| GSMUA_Achr7P14100_001 | Banana | cytosol | 61.49 | 60.74 |
| PGSC0003DMT400036613 | Potato | cytosol, nucleus, plasma membrane | 37.27 | 55.56 |
| KRH09272 | Soybean | cytosol | 56.52 | 51.12 |
| CDY29688 | Canola | extracellular, plasma membrane, vacuole | 40.37 | 50.0 |
| KRH38773 | Soybean | cytosol | 55.28 | 50.0 |
Protein Annotations
| EMBL:ACUP02011799 | EnsemblPlants:KRG94152 | EnsemblPlantsGene:GLYMA_19G065700 | EntrezGene:100527819 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Vesicle_transpt_Got1/SFT2 |
| InterPro:Vesicle_transpt_SFT2 | PANTHER:PTHR23137 | PANTHER:PTHR23137:SF14 | PFAM:PF04178 | ProteinID:KRG94152 | ProteinID:KRG94152.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00023D96CE | UniProt:I1N770 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr19:-:17595344..17600363
Molecular Weight (calculated)
17488.0 Da
IEP (calculated)
4.736
GRAVY (calculated)
0.924
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MWNIARTLTG DNEDQEEGLL GEDSGGLCSL STTQRIYGFA SCLVAGLACM LLSMIVFAKP IKFAALFTFG NLLAVGSTAF LLGPAQQLGM MVDPVRVFAT
101: AIYLGCVVIA LICALWIHSK VLTIIAIIIE IGALIWYSLS YIPFARRMVS ELMIRLCDTE L
101: AIYLGCVVIA LICALWIHSK VLTIIAIIIE IGALIWYSLS YIPFARRMVS ELMIRLCDTE L
001: MQKLNDIFSG GGDGDGTTDS FLEDGSEGLC ALSTTQRMYG FAASLATGLL LMFLSMIVFG IPIKFALLFT FGNVLAIGST AFLMGPEQQM SMMFDPVRFL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:Q6GKX4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.